Gene Information

Name : lspA (PAJ_0016)
Accession : YP_005932892.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase LspA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 19506 - 20009 bp
Length : 504 bp
Strand : +
Note : similar to Erwinia pyrifoliae Ep1/96, lipoprotein signal peptidase (NCBI: YP_002647731.1) COG: cell wall/membrane/envelope biogenesis subcellular localization as predicted by Psort 2.0: inner membrane

DNA sequence :
ATGAGTAGACCTGTTTTCTCCACCGGATTGCGCTGGCTGTGGCTGGTGCTGGTTGTTATCGTTGTTGATTTCGTCAGCAA
GCAGTGGGTCATGAACAACATGATGCTGCATGAAACGCAGCCGCTGATGCCGTTCCTTAACCTGTTCTATGCGCATAACT
ATGGCGCGGCGTTCAGCTTCCTCGCGGATAAAGGCGGCTGGCAGCGCTGGTTCTTTGCCGGCATTGCCCTGGCGATCGTG
GTGTCGTTACTGGTCATGATGTACCGCAACAGCGCCAGTCAGAAGATCGCCAATATCGCCTATGCCTTAATCATTGGCGG
CGCAGTGGGCAATCTGTTTGACCGTTCGTATCATGGCTTTGTGGTAGATTTTATCGATTTCTACGTCGGTAACTGGCACT
TTGCTACATTTAATATCGCTGACTGCGGCATCTGTATCGGGGCCGCGTTGGTGGTGCTGGAGGGCTTTTTCAATCCTTCC
AGCAAGCAGGTTAAAAAAGGGTAA

Protein sequence :
MSRPVFSTGLRWLWLVLVVIVVDFVSKQWVMNNMMLHETQPLMPFLNLFYAHNYGAAFSFLADKGGWQRWFFAGIALAIV
VSLLVMMYRNSASQKIANIAYALIIGGAVGNLFDRSYHGFVVDFIDFYVGNWHFATFNIADCGICIGAALVVLEGFFNPS
SKQVKKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 8e-21 45
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 7e-18 45
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 8e-18 45
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-17 45
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 2e-17 42
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-17 42
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 1e-17 42
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 1e-17 42
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 1e-17 42