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Name : pspF (PAJ_1353) Accession : YP_005934229.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Virulence Product : Psp operon transcriptional activator PspF Function : - COG functional category : - COG ID : - EC number : - Position : 1636833 - 1637846 bp Length : 1014 bp Strand : + Note : similar to Pantoea sp. At-9b, sigma54 specific transcriptional activator, PspF, Fis family (NCBI: ZP_05729588.1) COG: transcription subcellular localization as predicted by Psort 2.0: cytoplasmic DNA sequence : ATGTCTCCTAACAACGATAACCTGCTGGGCGAATCGAACAACTTTCTGGAAGTGCTGGAGCAGGTATCGAAACTCGCACC GTTGGAAAAACCGGTTTTGGTCGTGGGCGAACGCGGTACCGGTAAAGAGCTGATCGCCAGTCGTCTGCACTATCTGTCCG ATCGCTGGCAGGGCCCTTTTATCTCGCTCAACTGTGCCGCGCTAAATGAAAACCTGCTGGATTCGGAGCTGTTTGGACAT GAGGCAGGCGCCTTTACCGGCGCGCAAAAGCGTCACCTGGGCCGTTTTGAACGGGCAGACGGCGGCACGCTGTTCCTTGA TGAGCTGGCAACCGCCCCGATGCTGGTTCAGGAAAAACTCCTGCGGGTTATTGAATACGGTCAGCTTGAACGCGTAGGCG GGAATCACGTTTTTCAGGTGAATGTGCGCCTGATTTGCGCCACCAATGAAGACCTGCCCGCGCTGGCCGCCGCCGGGAAG TTTCGTGCCGATCTGCTCGATCGTCTGGCGTTCGATGTGGTTCAACTGCCGCCGCTCCGCGAGCGCCGTAGCGATATTCT GGTGATGGCGGACCATTTCGCCATCCAGATGTGCCGGGAGTTGACCTTGCCCCTGTTTCCCGGCTTTACTCAGCAGGCTC AGCAAACCTTACTGGAACACCCGTGGCCGGGTAACGTGCGTGAGCTAAAAAACGTCGTTGAGCGGTCGGTCTATCGCCAT AACACCAGCGATGAACCTCTGGATAACATCATTATCAACCCGTTTGAACGACGCACCGCCCCCGAAGATGCCCCGCCGCC TGCCCACGTGCCGGACGCGGCATCGGCCCTGCCTTCTTTACCGCTTGACCTGCGTCAGTGGCAGAATCAGCAGGAGCACG ATGTGGTAGAAATCAGCTTACAACAGGCGAAGTACAATCAACGTCGTGCCGCCAGCTTACTGGGTGTGACCTACCACCAG CTCAGAGCGATGATGAAAAAGCACGGGATTCAGGCGCGAGATGGACAAGCATAA Protein sequence : MSPNNDNLLGESNNFLEVLEQVSKLAPLEKPVLVVGERGTGKELIASRLHYLSDRWQGPFISLNCAALNENLLDSELFGH EAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGQLERVGGNHVFQVNVRLICATNEDLPALAAAGK FRADLLDRLAFDVVQLPPLRERRSDILVMADHFAIQMCRELTLPLFPGFTQQAQQTLLEHPWPGNVRELKNVVERSVYRH NTSDEPLDNIIINPFERRTAPEDAPPPAHVPDAASALPSLPLDLRQWQNQQEHDVVEISLQQAKYNQRRAASLLGVTYHQ LRAMMKKHGIQARDGQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 3e-35 | 42 |
