Gene Information

Name : tpx (PAJ_1345)
Accession : YP_005934221.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Virulence
Product : thiol peroxidase Tpx
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1630286 - 1630789 bp
Length : 504 bp
Strand : +
Note : similar to Pantoea sp. At-9b, Redoxin domain protein (NCBI: ZP_05729579.1) COG: posttranslational modification, protein turnover, chaperones subcellular localization as predicted by Psort 2.0: periplasmic

DNA sequence : 
ATGTCTCAGACTGTTCACTTTCAGGGCAACCCTGTAGCGGTTGCAGGTCAGTTCCCGCAGCCGGGCGATAGCGTTAACGC
TTTTACCCTCGTGGCGAAAAACCTGTCTAACGTTTCACTCTCTGAGTATGCAGGAAAACGCAAGATTCTGAATATTTTTC
CCAGCGTCGATACCGGCGTGTGCGCCTCTTCGGTGCGCAAGTTTAACCAGTTAGCGGGCGAACTGAATAACACGGTGGTG
TTATGTATTTCCGCCGACCTGCCCTTTGCTCAATCGCGTTTTTGTGGCGCAGACAACCTCAACAACGTGGTTACGCTGTC
AACGCTGCGCGGCGGGGAATTCAAAAAAGATTTTGGCGTGGAAATTGCTGATGGTGCCCTTCAGGGTCTGACGGCCCGTG
CCGTTATCGTACTGGATGAGCATGACAAAGTGCTTTACAGCCAGCTGGTGAATGAGATCACCACTGAACCCGATTATGAT
GCCGCACTCGCTGCGCTGAAATAA

Protein sequence : 
MSQTVHFQGNPVAVAGQFPQPGDSVNAFTLVAKNLSNVSLSEYAGKRKILNIFPSVDTGVCASSVRKFNQLAGELNNTVV
LCISADLPFAQSRFCGADNLNNVVTLSTLRGGEFKKDFGVEIADGALQGLTARAVIVLDEHDKVLYSQLVNEITTEPDYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 9e-36 50
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-36 50
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-35 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-35 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_005934221.1 thiol peroxidase Tpx VFG0087 Protein 3e-36 50