Gene Information

Name : arsB (PAJ_1224)
Accession : YP_005934100.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein ArsB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1465970 - 1467325 bp
Length : 1356 bp
Strand : -
Note : similar to Strongylocentrotus purpuratus, predicted: hypothetical protein (NCBI: XP_001204083.1) COG: inorganic ion transport and metabolism subcellular localization as predicted by Psort 2.0: inner membrane

DNA sequence :
ATGATTTTTCATATCTGTTTGCAGGGCTGTCTTACGTCCTGTTTACCAGACTTTGTATTAAAAGGAAAAAGTATGTTTCT
GGCAGGCGCTATATTCGTCCTGACACTGGTACTGGTTATCTGGCAGCCAAAAGGGCTGAGTATTGGCTGGAGTGCTGTTA
TCGGGGCTGCGCTGGCCCTGCTGACGGGCGTAGTGCATTTCGGCGATATTACGGCCGTCTGGCAGATCGTTTGGAACGCG
ACGGCCACGTTTATCGCGGTGATTATCATCAGCCTGCTGCTCGATGAATCTGGTTTTTTTGAGTGGGCTGCCCTGCACGT
TTCCCGATGGGGTGGCGGTAAAGGCAGGCTGCTGTTCACGTATAGTGTTCTGCTGGGTGCGGCAGTGGCGGCCTTGTTTG
CGAATGACGGGGCGGCACTGATCCTGACGCCTGTTGTCATTGCCATGCTGTTGGCGCTGGGCTTCAGCCCCGGCGCAACG
CTGGCGTTTGTGATGGCGGCAGGTTTTATCGCTGACACATCCAGCCTGCCACTCATCGTATCGAACCTGGTTAACATCGT
GACGGCGGACTTTTTTAAGCTGGGATTCAGCGAATACGCGTCTGTCATGATGCCGGTCAACATGGCATCCGTGGCGGCCA
CGCTGGTTATGCTTCACTTCTTCTTCCGTAAAGACATCCCGGTCGCCTATGACATGGCAAAACTAAAGGTACCACGGGAA
GCCATTCGTGACGTGCGAACCTTTAAAGCCGGATGGCTGGTTCTGTGTCTGTTGCTGACCGGTTTTTTTGCTCTGGAGCC
GCTCGGCGTTCCGGTCAGTCTGGTTGCTGCGGTCGCGGCATTTATTCTGTGGCTGGTTGCCCGTAAAGGACAGGTGATTG
ATACCCGTAAAGTCCTGAAAGGCGCGCCCTGGCAGATCGTCACCTTCTCGCTGGGTATGTATCTGGTGGTTTATGGCCTG
CGTAACGCCGGACTGACGGATTACCTCTCGTCCGCCCTGAACGGGTTTGCAGAGCATGGTGTATGGGGAGCCACATTCGC
TACCGGTTTTCTGACGGCCTTTCTGTCATCGGTGATGAACAACATGCCTACCGTCCTGGTCGGTGCCCTTTCCATTGATG
GCAGCACGGCTGAGGGTGTGGTGAAAGAGGCGATGATTTACGCCAATATCATCGGTTGCGATCTTGGTCCGAAAATCACC
CCCATCGGCAGCCTGGCGACCCTGCTGTGGCTACACGTTCTGGCGCAGAAAAATATCACCATCAGCTGGAGCAACTACTT
CCGCGTGGGCGTTGTGATGACCCTGCCGGTACTTTTTGTCACGCTGGCGGCGCTGGCCCTGCGTCTTTCTGTTTAA

Protein sequence :
MIFHICLQGCLTSCLPDFVLKGKSMFLAGAIFVLTLVLVIWQPKGLSIGWSAVIGAALALLTGVVHFGDITAVWQIVWNA
TATFIAVIIISLLLDESGFFEWAALHVSRWGGGKGRLLFTYSVLLGAAVAALFANDGAALILTPVVIAMLLALGFSPGAT
LAFVMAAGFIADTSSLPLIVSNLVNIVTADFFKLGFSEYASVMMPVNMASVAATLVMLHFFFRKDIPVAYDMAKLKVPRE
AIRDVRTFKAGWLVLCLLLTGFFALEPLGVPVSLVAAVAAFILWLVARKGQVIDTRKVLKGAPWQIVTFSLGMYLVVYGL
RNAGLTDYLSSALNGFAEHGVWGATFATGFLTAFLSSVMNNMPTVLVGALSIDGSTAEGVVKEAMIYANIIGCDLGPKIT
PIGSLATLLWLHVLAQKNITISWSNYFRVGVVMTLPVLFVTLAALALRLSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-152 81
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-103 57
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-100 56
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-106 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_005934100.1 arsenical pump membrane protein ArsB BAC0576 Protein 9e-153 81
arsB YP_005934100.1 arsenical pump membrane protein ArsB BAC0578 Protein 1e-152 81
arsB YP_005934100.1 arsenical pump membrane protein ArsB BAC0577 Protein 1e-148 80
arsB YP_005934100.1 arsenical pump membrane protein ArsB BAC0031 Protein 8e-146 79
arsB YP_005934100.1 arsenical pump membrane protein ArsB BAC0574 Protein 3e-102 56
arsB YP_005934100.1 arsenical pump membrane protein ArsB BAC0575 Protein 1e-105 56