Gene Information

Name : ydfG (PAJ_1218)
Accession : YP_005934094.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : oxidoreductase short-chain dehydrogenase/reductase family protein YdfG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1460633 - 1461355 bp
Length : 723 bp
Strand : +
Note : similar to Escherichia coli O157:H7 str. EC4196, clavaldehyde dehydrogenase (NCBI: ZP_02800435.2) COG: carbohydrate transport and metabolism subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
ATGAATAAGGTTATATTAATTACCGGCGCATCCAGTGGTATTGGGGAAGGTATTGCCAGAGAGTTAGGGGCGACAGGCGC
GAAGGTGTTACTGGGAGCACGCAGACTGGCGCGTATTGAAGCCATTGCAGCGGAAATCTGCAGCGCAGGCGGTATCGCGC
AAGCACATTTGTTGGATGTCACAGACCGGGTATCTATGGCCGCCTTTGTTCAGGCCGCGCTGGATAACTGGGGCAGGGTT
GATGTTCTCATCAATAATGCGGGCGTTATGCCGCTTTCACCGCTTGCAGCCGGAAAACAGGACGAATGGGAACGCATCAT
TGACGTCAATATCAAGGGCGTGCTGTGGGGGATTGGTGCCGTACTTCCGTTGATGGAAGCGCAGGGTTCCGGACAGATAA
TCAATATTGGCTCGATTGGCGCCCTTTCTGTCGTACCCACCGCCGCGGTCTACTGTGCTTCCAAGTTCGCCGTACGGGCT
ATTTCTGATGGCCTGCGGCAGGAAAGCTCAAAAATCCGCGTGACCTGTGTCAATCCAGGGGTGGTAGAAAGTGAACTGGC
GTCGACGATTACCCATGCGGAAACGATGGCGGCAATGGACGCTTACCGTTCTGTTGCCCTTAAACCCGCGGATATTGCCC
GTGCCGTAAGGCACATTATTGAAGCGCCTGAAAACGTTGACACAACAGAAATAACTATCAGACCCACAGCGTCGCCAAAC
TGA

Protein sequence :
MNKVILITGASSGIGEGIARELGATGAKVLLGARRLARIEAIAAEICSAGGIAQAHLLDVTDRVSMAAFVQAALDNWGRV
DVLINNAGVMPLSPLAAGKQDEWERIIDVNIKGVLWGIGAVLPLMEAQGSGQIINIGSIGALSVVPTAAVYCASKFAVRA
ISDGLRQESSKIRVTCVNPGVVESELASTITHAETMAAMDAYRSVALKPADIARAVRHIIEAPENVDTTEITIRPTASPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 3e-29 46
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 2e-33 45