|
Name : umuC (PAJ_1106) Accession : YP_005933982.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Unknown Product : nucleotidyl transferase/DNA polymerase DNA repair protein UmuC Function : - COG functional category : - COG ID : - EC number : - Position : 1325897 - 1327159 bp Length : 1263 bp Strand : + Note : similar to Erwinia tasmaniensis Et1/99, UmuC protein (NCBI: YP_001907390.1) COG: DNA replication, recombination and repair subcellular localization as predicted by Psort 2.0: unknown DNA sequence : ATGTTTGCGCTGGTGGACGTGAACAACTTTTATGCCTCCTGTGAAACGGTGTTTCGGCCCGATCTCAAAGGAAAGCCCAT TATTGTGTTATCTAACAACGATGGCTGTGTGATTGCACGCAATGCGGAGGCAAAAGCCCTGGGCATTACGATGGCCGTGC CCTTTTTCAAAATGCGGGAGATTATTGCCCGTCACAACGTGCAGGTTTTTAGTTCCAACTACGCCCTTTATGCGGATATG AGTACCAGAGTGATGACGCTGCTGGAGGAAATGGCGCCCTCGGTAGAGATTTATTCCATTGACGAAGCCTTTCTGGATCT GACGGGCGTCAGTCACTGTATGTCGCTCGACACCTTCGGCCGCGAGATCAAAACCCGAATAAAAAAAGAAGTTCATCTCA ATGTGTGCGTCGGCATTGCCCCCACTAAGACGCTGGCAAAGCTGGCTAACCATGCCGCAAAAAAGTGGAGTAAGACAGGC GGTGTTCTGGATTTGTCCAACAGAGAACGACAGAAAAAGTTGCTTTCACTTGTGCCGGTCGCCGATATATGGGGCGTTGG CAGACGGCTCAGCCAGCGACTTGAGGAAATGGGGATTAAAACGGCAGATGATTTAGCCTGCCAGAGCACCAGCCTGATTC GTAAAAATTTCAGCGTGGTGCTGGAGCGCACCGTAAGAGAGTTGCGCGGCGAACCCTGTCAGGATCTGGAGGCGCTCGAA CCCACCAAACAACAGATTATGTGCTCACGCTCCTTCAGCAGTCGCCTGTCAGACTATGCGCAGGTGCGGCAGGCCGTCTG CACCTACGCCGAACGTGCGGCCGAAAAACTTCGCAAAGAAAAACAGTACTGCAGACAAATCGGTGTGTTTTTGCGCACCA GTCCACACGCGCCCGGCGAAAATTTTTACGGTAATCAGGCCACGGGGCAACTCCTGACGCCGTCTCACGATACGCGCGAC ATCATCCGGGTGGCGACCGAGATGCTCGACTATATCTGGATAGAAGGGCATCGCTATATCAAGGCCGGCATTGTCCTGAG TGATTTTTTCGACCATGGCGTAACGCAGCTGGATCTGTTCGACGAACGATCGGTTAACCCCGGCCGTAACGATCTGATGC AGGTGATCGATTTGATTCACAAAGAGGGCAAAGGAAAGATGTGGTTTGCCGGGCAGGGGACGGAAAAACGCTGGGCCATG AAGCGCGAGATGCTGTCGCCGGCTTACACCACCCGCCTCAGCGATTTGCCCGTGGTGAAGTGA Protein sequence : MFALVDVNNFYASCETVFRPDLKGKPIIVLSNNDGCVIARNAEAKALGITMAVPFFKMREIIARHNVQVFSSNYALYADM STRVMTLLEEMAPSVEIYSIDEAFLDLTGVSHCMSLDTFGREIKTRIKKEVHLNVCVGIAPTKTLAKLANHAAKKWSKTG GVLDLSNRERQKKLLSLVPVADIWGVGRRLSQRLEEMGIKTADDLACQSTSLIRKNFSVVLERTVRELRGEPCQDLEALE PTKQQIMCSRSFSSRLSDYAQVRQAVCTYAERAAEKLRKEKQYCRQIGVFLRTSPHAPGENFYGNQATGQLLTPSHDTRD IIRVATEMLDYIWIEGHRYIKAGIVLSDFFDHGVTQLDLFDERSVNPGRNDLMQVIDLIHKEGKGKMWFAGQGTEKRWAM KREMLSPAYTTRLSDLPVVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 1e-122 | 58 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 1e-122 | 58 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 5e-86 | 47 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 4e-70 | 47 |
