Gene Information

Name : lspA (PPUBIRD1_0655)
Accession : YP_005928550.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : protein LspA
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.23.36
Position : 748493 - 749008 bp
Length : 516 bp
Strand : +
Note : Lipoprotein signal peptidase

DNA sequence :
ATGCCTAACCCTGCAGCGGGGCGCTTCGGGCGCCTTGCATGGCTGTGGCTGAGCTTGCTGGTCCTGGTCGTCGACCAGGC
CACCAAGCTGTACTTCAACAACGCTCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGG
CCTACAACACCGGTGCCGCGTTCAGCTTCCTGGCTGACGGTGCGGGTTGGCAGCGCTGGTTGTTCGCCCTGATCGCCGTG
GTGGTCAGCGCGGTACTGGTCGTCTGGCTCAAGCGCCTGGGGCGCAACGAGACCTGGCTGGCCGTGGCGCTGGCGCTGGT
GCTGGGTGGGGCGATTGGCAACCTGTACGACCGCATCGTGCTGGGCCATGTGGTCGACTTCATCCTGGTGCACTGGCAGA
ACCGTCATTACTTCCCGGCCTTCAACGTGGCCGACAGCGCCATCACCGTTGGTGCGGTGATGCTGGCGTTGGATATGTTC
AAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGA

Protein sequence :
MPNPAAGRFGRLAWLWLSLLVLVVDQATKLYFNNALTMYQQIVVIPDYFSWTLAYNTGAAFSFLADGAGWQRWLFALIAV
VVSAVLVVWLKRLGRNETWLAVALALVLGGAIGNLYDRIVLGHVVDFILVHWQNRHYFPAFNVADSAITVGAVMLALDMF
KSKKSEDPVHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 5e-05 43
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 5e-05 43
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 3e-05 43
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 3e-05 43
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 3e-05 43