|
Name : katA (PPUBIRD1_0518) Accession : YP_005928417.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : protein KatA Function : - COG functional category : - COG ID : - EC number : 1.11.1.6 Position : 587792 - 589231 bp Length : 1440 bp Strand : + Note : Catalase DNA sequence : ATGAGCAAGATTCTCACCACCGCTAGCGGTGCACCTGTAGCCGACAACCAGAACTCCCGCTCCGCCGGCCCGCGCGGTCC GCTGCTGCTCGACGACTTCCACCTGATCGAGAAGCTCGCCCATTTCAACCGCGAGAACATTCCTGAGCGCCGCGTCCATG CCAAAGGCTCGGGCGCCTACGGTACCTTTACCGTTACTCACGATATCACCGGCTATACCAGCGCCAAGCTGTTCGAAGAG GTCGGTAAACAAACCGAGACTTTCTTACGGTTCTCCACCGTTGGTGGCGAGCGCGGCTCTGCAGATACCGAGCGTGACCC GCGTGGCTTCGCGGTGAAGTTCTACACCGAAGAAGGTAACTGGGACATCGTCGGTAACAACACGCCAGTGTTCTTCATTC GTGATCCACTGAAGTTCCCGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATG TGGGACTTCTGGTCGCACTCCCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGACCGTGGCATTCCGGACGGCTA CCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACT TCAAGACCCAACAAGGCATCAAGAACCTCACCCCGGCAGACGCTGCACGCCTGGCAGGTACCGACCCGGACTACGCTCAG CGCGACCTCTTCGAGGCCATCGAGCGTGGCGACTACCCGCGCTGGACTGTCTGCATTCAGGTGATGAGCGAAGCCGAGGC TGCCAGCCGCGATGAGAACCCATTCGACGTGACCAAGACCTGGTCGCAGAAGGATTATCCGCTCATCGAGGTGGGTGTAC TGGAGCTCAACCGTAACCCGCTCAACTATTTTGCGGAGGTCGAGCAGGCCGCGTTCGGGCCGAGCAATATGGTGCCCGGC GTCGGTCTTTCCCCGGACCGCATGCTGCAAGGCCGTGTATTCGCCTACGCTGACGCGCACCGCTATCGCGTGGGTACCAA CCACCAGCAATTGCCAGTCAACGCGCCACGCTGCCCGGTGAACAGCTACCAGCGTGACGGCTCGATGGCCACCGGCAGTT ACGGTAGTGCACCGAACTACGAGCCAAACAGCTACAGCGATGCCCCGAAACAGTCGCCACGTCATGTTGAGCCAGCATTG GCCATGAATGGTTCGGCTGATCGCTACGATCACCGCGAGGACACCGACTACTTCAGCCATGCCGGCGCTTTGTTCCGTTT GATGAACGATGAGCAGAAGGCCCTGCTGATCAGCAACATCGCCGGTACCATGGCGGGCGTCAGCGAAGACGTGATCCAGC GTCAGCTACAGTACTTTTTCAAGGCGGATCCGGCCTACGGCGAAGGAATTGCCAAGGCTTTGGGCATCAATCTCGCCTAA Protein sequence : MSKILTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTHDITGYTSAKLFEE VGKQTETFLRFSTVGGERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSNLKNAQMM WDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAKGERTWVKWHFKTQQGIKNLTPADAARLAGTDPDYAQ RDLFEAIERGDYPRWTVCIQVMSEAEAASRDENPFDVTKTWSQKDYPLIEVGVLELNRNPLNYFAEVEQAAFGPSNMVPG VGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRCPVNSYQRDGSMATGSYGSAPNYEPNSYSDAPKQSPRHVEPAL AMNGSADRYDHREDTDYFSHAGALFRLMNDEQKALLISNIAGTMAGVSEDVIQRQLQYFFKADPAYGEGIAKALGINLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 6e-147 | 63 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 8e-109 | 51 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-104 | 48 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-104 | 48 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-104 | 48 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-104 | 48 |
