Gene Information

Name : rph (PPUBIRD1_5087)
Accession : YP_005932839.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5691664 - 5692386 bp
Length : 723 bp
Strand : -
Note : Ribonuclease PH

DNA sequence :
ATGAAACGTCCAAGTGGTCGCGTTGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAGCACGCCGAAGG
GTCGGTACTGGTCGAGTTCGGTGACACCAAAGTCATCTGCACGGTCAGCGTTGAAAACGGTGTACCGCGCTTCCTCAAAG
GCCAGGGCCAAGGCTGGCTGACCGCCGAGTATGGCATGCTGCCGCGCTCCACCGGCGAACGTAACCAGCGCGAAGCCAGC
CGTGGCAAGCAGGGTGGCCGCACTCTGGAAATCCAGCGCCTGATCGGCCGTTCGCTGCGCGCCGCGCTGGACATGAGCAA
GCTCGGTGACATCACCCTGTACGTCGATTGCGACGTGATCCAGGCCGATGGCGGTACCCGTACCGCGTCCATCACCGGCG
CCATGGTTGCCTTGTGCGACGCTTTGGCAGTCATCAAGAAGCGCGGCGGCCTCAAGGGCGGCAACCCGCTCAAGCACATG
ATCGCTGCCGTGTCGGTAGGCATGTACCAGGGCGAAGCGGTGCTCGACCTGGACTACCTGGAAGACTCCGCAGCCGAAAC
CGACCTGAATGTGGTCATGACCAGCGCTGGTGGTTTCATCGAAGTGCAGGGTACTGCCGAAGGCGCACCGTTCCAGCCGG
AAGATTTCAACGCCATGCTCGCTTTGGCGCAGAAGGGCATTAACGAGATTTTCGAGCTGCAGCAGGCAGCACTGGCTGAC
TGA

Protein sequence :
MKRPSGRVADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREAS
RGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITGAMVALCDALAVIKKRGGLKGGNPLKHM
IAAVSVGMYQGEAVLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGINEIFELQQAALAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-63 59