Gene Information

Name : hslU (PPUBIRD1_4789)
Accession : YP_005932548.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : protein HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5346821 - 5348164 bp
Length : 1344 bp
Strand : +
Note : ATP-dependent hsl protease ATP-binding subunit hslU

DNA sequence :
ATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGC
CATTGCCCTGCGCAACCGCTGGCGGCGTATGCAGCTCCCTGCAGAGCTGCGTGCCGAAGTCACCCCCAAGAACATCCTGA
TGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTC
GAAGCCACCAAGTTCACCGAAGTGGGCTACGTGGGCCGCGACGTCGAGTCGATCATCCGTGACCTGGCCGATGCCGCGCT
GAAGATGCTGCGCGAGCAGGAAATCATCCGCGTGCGCCACCGCGCCGAAGACGCCGCCGAAGACCGCATCCTCGACGCCC
TGCTGCCCCAGGCACGCGTCACCAGCTTCAGCGAAGAAGCCGCACAGACCAGCAGCGACTCCAACACCCGCCAGCTGTTC
CGCAAGCGCCTGCGCGAAGGCCAGCTGGACGACAAGGAAATCGAGATTGAAGTGGCCGATGCCGTCGGTGTCGAAATTGC
TGCGCCGCCCGGCATGGAAGAAATGACCAACCAGCTGCAGAGCCTGTTTGCCAACATGGGCAAGGGCAAGCGCAAAGCGC
GCAAGCTGAAGGTGAAAGAAGCGCTGAAGATGGTTCGCGATGAAGAAGCGAGCCGCCTGGTCAACGAGGAAGAGCTCAAG
GCCAAGGCCCTGGAAGCAGTCGAACAGCACGGTATCGTGTTCATCGACGAAATCGACAAGGTTGCCAAGCGTGGCAACGT
TGGCGGTGCCGACGTGTCCCGTGAAGGCGTACAGCGCGACCTGCTGCCGCTGATCGAAGGCTGCACCGTCAACACCAAGC
TGGGCATGGTCAAGACCGACCACATTCTGTTCATTGCCTCGGGTGCGTTCCACCTGAGCAAGCCGAGCGACCTGGTGCCC
GAGCTGCAAGGCCGTCTGCCGATTCGTGTCGAGCTGAAAGCACTGACCCCGGAAGACTTCGAGCGTATCCTGCAGGAGCC
GCACGCGTCGCTGACCGAGCAGTACCAGGCATTGCTGAAGACCGAAGGCCTGAACATCGAATTCCTCGCCGACGGCATCA
AGCGCCTGGCCGAGATTGCCTACCAGGTCAACGAGAAGACCGAAAACATCGGTGCTCGCCGCCTGCACACCCTGCTCGAG
CGCTTGCTCGAAGAGGTGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGC
ATATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATCCTGTAA

Protein sequence :
MSMTPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPAELRAEVTPKNILMIGPTGVGKTEIARRLAKLANAPFLKV
EATKFTEVGYVGRDVESIIRDLADAALKMLREQEIIRVRHRAEDAAEDRILDALLPQARVTSFSEEAAQTSSDSNTRQLF
RKRLREGQLDDKEIEIEVADAVGVEIAAPPGMEEMTNQLQSLFANMGKGKRKARKLKVKEALKMVRDEEASRLVNEEELK
AKALEAVEQHGIVFIDEIDKVAKRGNVGGADVSREGVQRDLLPLIEGCTVNTKLGMVKTDHILFIASGAFHLSKPSDLVP
ELQGRLPIRVELKALTPEDFERILQEPHASLTEQYQALLKTEGLNIEFLADGIKRLAEIAYQVNEKTENIGARRLHTLLE
RLLEEVSFSAGDLASTHDEAPIQIDAAYVNSHLGELAQNEDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 3e-84 47