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Name : thiC (PPUBIRD1_4709) Accession : YP_005932472.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : protein ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 5253777 - 5255657 bp Length : 1881 bp Strand : - Note : Phosphomethylpyrimidine synthase DNA sequence : ATGACCAAACAAGAAAAAGCGATCAACCTCAGCGAATCGGCACAAGTCGATCAGCAGTCCGTGCAACCGTTCCCGCGTTC GCGCAAGATTTATGTCGAAGGCTCGCGCCCGGACATCCGCGTTCCCATGCGTGAAATCAGCCTGGATGACACCCCGACCG ATTTTGGCGGCGAGTCCAACGCCCCGGTGCTGGTGTATGACACGTCTGGCCCGTACACCGACCCCGACGTGATCATCGAC GTGCGCAAAGGCCTGCCCGATGTGCGTTCGGCGTGGATCGAAGCCCGCGGTGACACCGAGCGCCTGGAAGGCCTGAGCTC CGACTTCGGTCAGCAGCGCCTGAACGATGCAGAGCTGGCCAAGCTGCGTTTCGCCCATGTGCGCAACCCGCGCCGGGCCA AGGCCGGCGCCAACGTCTCGCAGATGCACTATGCCCGTCAGGGCATCATCACCGCCGAAATGGAATACGTGGCCATCCGC GAGAACATGAAGCTACAGGAGGCCCGCGCCGCCGGCCTGCTGAATGAGCAACATGCCGGCCACAGCTTCGGTGCCAACGT CCCGAAAGAAATCACCCCTGAATTCGTCCGCCAGGAAATCGCCCGTGGCCGCGCGATCATTCCGGCCAACATCAACCACC CGGAAGTAGAGCCGATGATCATCGGCCGCAACTTCCTGGTGAAGATCAACGGCAACATCGGCAACAGCGCCCTGGGTTCC TCGATCGAGGAAGAGGTGGCCAAGCTGACCTGGGGCATCCGCTGGGGCTCGGACACGGTCATGGACCTGTCCACCGGCAA GCACATCCACGAAACCCGCGAGTGGATCATTCGCAACTCGCCGGTGCCGATCGGTACCGTGCCGATCTACCAGGCCCTGG AAAAGGTCAACGGCGTGGCAGAGGACCTGACCTGGGAACTGTTCCGCGACACCCTGATCGAGCAGGCCGAACAGGGCGTG GACTACTTCACCATTCACGCCGGTGTGTTGCTGCGCTATGTGCCCCTGACCGCCAAGCGGGTCACCGGCATCGTCAGCCG CGGTGGCTCGATCATGGCCAAGTGGTGCCTGGCGCACCACAAGGAAAACTTCCTGTACACCCACTTCGACGAAATCTGCG AAATCATGAAGGCCTACGACGTCAGCTTCTCGCTGGGCGACGGCCTGCGCCCTGGCTCGATTGCCGACGCCAACGACGCC GCGCAATTCGGTGAGCTGGAAACCCTCGGCGAGCTGACCAAGATTGCCTGGAAGCACGACGTGCAATGCATGATCGAAGG CCCCGGCCACGTGCCGATGCAGTTGATCAAAGAGAACATGGACAAGCAGCTGGAGTGCTGCGACGAGGCGCCGTTCTACA CCCTCGGCCCACTGACCACCGACATCGCGCCGGGTTACGACCACATCACCTCGGGCATTGGTGCGGCGATGATCGGCTGG TTCGGTTGCGCCATGCTCTGCTACGTCACGCCGAAGGAGCACCTGGGCCTGCCGAACAAGGACGACGTCAAGACCGGCAT CATCACCTACAAGATCGCCGCGCATGCCGCCGACCTTGCCAAGGGCCACCCGGGTGCACAGATTCGCGACAACGCCTTGT CCAAGGCGCGTTTCGAGTTCCGTTGGGAAGACCAGTTCAACCTGGGCCTCGACCCGGACACCGCCCGTGCTTTCCACGAC GAGACCCTGCCGAAGGAATCGGCCAAGGTCGCGCACTTCTGCTCGATGTGCGGGCCGAAGTTCTGCTCGATGAAGATCAC CCAGGAAGTGCGTGAGTACGCTGCCAAGATCGAGGCCGTGGATGTGACGGTCGAGCAAGGCATGCGTGAGCAGGCCGAGC GGTTCCGCCAGGAAGGCAGCCAGCTGTACCACAAAGTCTAA Protein sequence : MTKQEKAINLSESAQVDQQSVQPFPRSRKIYVEGSRPDIRVPMREISLDDTPTDFGGESNAPVLVYDTSGPYTDPDVIID VRKGLPDVRSAWIEARGDTERLEGLSSDFGQQRLNDAELAKLRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIR ENMKLQEARAAGLLNEQHAGHSFGANVPKEITPEFVRQEIARGRAIIPANINHPEVEPMIIGRNFLVKINGNIGNSALGS SIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWELFRDTLIEQAEQGV DYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDA AQFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW FGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAFHD ETLPKESAKVAHFCSMCGPKFCSMKITQEVREYAAKIEAVDVTVEQGMREQAERFRQEGSQLYHKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 78 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 78 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
