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Name : dnaB (PPUBIRD1_4663) Accession : YP_005932428.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : DnaB protein Function : - COG functional category : - COG ID : - EC number : - Position : 5203762 - 5205165 bp Length : 1404 bp Strand : - Note : replicative DNA helicase DNA sequence : GTGGCCATGAACGAGATCACCACCTCCGAACAGCTTGACCTGCAAACCGCAGCCTTGAAGGTACCGCCGCATTCCATCGA GGCCGAACAGGCCGTGCTCGGTGGCCTGATGCTGGACAACAATGCCTGGGAGCGGGTGCTGGACCAGGTGTCGGACGGCG ACTTCTACCGGCATGACCACCGGCTGATCTTCCGCGCTGTGCACAAGTTGGCCGACGCCAACCAGCCATTCGACGTGGTG ACCCTGCACGAGCAGTTGGACAAGGAAGGCCTGTCCTCGCAAGTCGGCGGCTTGGCCTACCTGGCCGAGCTGGCCAAGAA CACCCCTTCGGTGGCCAACATCAAGGCCTACGCCGCGATCATTCGTGAGCGGGCCACGTTGCGCCAGCTGATCAGCATCA GTACCGACATCGCCGACAACGCGTTCAACCCGCAGGGGCGCAACGCTGCCGAGATTCTCGACGATGCCGAACGGCAGATC TTCCAGATCGCCGAGGCGCGGCCTAAAACCGGCGGCCCGGTGGGCGTCAACGAGCTGTTGACCATGGCCATCGACCGCAT CGATACGCTGTTCAACTCCGACAGTGACATCACCGGTATCTCCACCGGTTACACCGACCTGGACGAGAAGACCAGCGGCC TGCAGGCAGCCGACCTGATCATCGTCGCGGGTCGTCCGTCGATGGGTAAGACCACCTTCGCCATGAACCTGGTGGAAAAC GCCGTACTGCGTACCGACAAGGCGGTGTTGGTGTTCTCCCTCGAGATGCCAGGTGAGTCGCTGATCATGCGTATGCTCTC GTCCCTGGGGCGTATCGACCAGACCAAGGTCCGCTCCGGCCAGCTGGACGACGACGACTGGCCGCGCCTGACCTCGGCAG TGAACCTGCTCAACGACCGAAAATTGTTCATCGACGATACTGCGGGCATCAGCCCCTCGGAAATGCGCGCGCGTACCCGC CGCCTGGCCCGTGAGCATGGTGAAATCGCCATGATCATGGTCGACTACCTGCAGCTGATGCAGATCCCGGGGTCGGCCGG TGACAACCGTACCAACGAAATTTCCGAGATTTCCCGCTCGCTCAAGGCCCTGGCCAAAGAATTCAACTGCCCGGTCATTG CCCTTTCGCAGCTGAACCGCTCGTTGGAGCAGCGCCCGAACAAACGCCCGGTGAACTCCGACTTGCGTGAATCCGGTGCA ATCGAGCAGGACGCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTACCACCCCGAGACCGAGCACAAGGGCGTGGC GGAAATCATCATCGGCAAACAGCGTAACGGCCCCATCGGTTTCGTGCGTTTGGCGTTTATCGGCAAGTACACCCGGTTCG AGAACTTGGCGCCGGGGATGTACAACTTTGATGATGATGAATAA Protein sequence : MAMNEITTSEQLDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAVHKLADANQPFDVV TLHEQLDKEGLSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLISISTDIADNAFNPQGRNAAEILDDAERQI FQIAEARPKTGGPVGVNELLTMAIDRIDTLFNSDSDITGISTGYTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVEN AVLRTDKAVLVFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRARTR RLAREHGEIAMIMVDYLQLMQIPGSAGDNRTNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGA IEQDADVIMFVYRDEVYHPETEHKGVAEIIIGKQRNGPIGFVRLAFIGKYTRFENLAPGMYNFDDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 7e-119 | 58 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-106 | 56 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-104 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 6e-104 | 52 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 6e-104 | 52 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-98 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-96 | 46 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-96 | 46 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-78 | 42 |
