Gene Information

Name : PPUBIRD1_4536 (PPUBIRD1_4536)
Accession : YP_005932304.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : Transposase IS3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5063127 - 5063420 bp
Length : 294 bp
Strand : +
Note : -

DNA sequence : 
ATGTACCCAACCACTCGCCGCAATTACACCAATGAGTTCAAGATTCAGGCCGTTGCGCTGGCTGAAACGCTTGGCAGGAC
GGAAGCTGCTCGCCAGCTGGAGATGTCTGTGAAAACGTTGGACAACTGGGTCAACGCTTCCCGCAACGGCCAGCCGTTGA
GCTCTCCTGACCGTCGCGCAATCACTAGAGAGGACAGCGAGTTAGCACGATTGCGAGCCGAGAACGCCGAGCTGAAACTG
GAGCGTGAAATCCTAAAAAAGTCGGCGGTATTCTTTGCCAAAGAGTCCAGGTGA

Protein sequence : 
MYPTTRRNYTNEFKIQAVALAETLGRTEAARQLEMSVKTLDNWVNASRNGQPLSSPDRRAITREDSELARLRAENAELKL
EREILKKSAVFFAKESR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09021.1 unknown Not tested SHI-O Protein 7e-13 42
unnamed AAF09029.1 unknown Not tested SHI-O Protein 7e-13 42
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 5e-13 42
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 4e-13 42
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 4e-13 42
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-13 42
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 5e-11 42
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 5e-11 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPUBIRD1_4536 YP_005932304.1 Transposase IS3 VFG1707 Protein 2e-13 42