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Name : murD (PPUBIRD1_4228) Accession : YP_005932010.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : protein MurD Function : - COG functional category : - COG ID : - EC number : 6.3.2.9 Position : 4721416 - 4722756 bp Length : 1341 bp Strand : - Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase DNA sequence : TTGATCGCTTCCGACCAATTCCGCATCGTTGTCGGCCTCGGCAAGAGCGGCATGTCCCTGGTTCGCTTCCTGGCGAGCCG GGGCATTGCCTTTGCGGTCGCCGATACCCGCGAGCAACCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGG AAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGTTGTACGTGAGCCCCGGTCTGGCCTTGGCC ACGCCGGCCTTGCAGCAGGCGGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGC GCCGATCATTGCCATCAGCGGCTCCAACGCCAAGAGCACCGTTACGACGCTGGTCGGTGAAATGGCCGCCAAGGCCGGCA AACGCGTGGCCGTGGGCGGTAACCTCGGTACCCCGGCGCTCGACCTGCTGGCCGATGACATCGAGCTGTACGTGCTGGAG CTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACAT GGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAGCACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACC GCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAA GCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCATTCGAGTTCCAGACGCTGATGCCGGCGCGCGAACTGAA GGTTCGCGGTGCTCACAACCAGAGCAACGCCCTGGCGGCGCTGGCCCTGGGGCATGCTGCAGGCCTGCCGTTCGAGCCCA TGCTCGAGGCCCTGCGCGAGTTCGGTGGCCTGGCCCACCGTTGCCAGTGGGTACGCGAGCGTAATGGCGTGAACTGGTAT GACGATTCCAAGGCCACCAACGTCGGTGCAGCCCTGGCCGCCATCGAAGGCCTGGGCGCCGATATCGAAGGCAAGTTGGT GCTGATCGCCGGTGGTGACGGCAAAGGTGCTGAATTCACTGCGCTGCGCGAGCCGGTCAAGCGTTTCTGCCGCGCCGTGG TACTGCTTGGCCGTGATGCCGAGCGCCTGGCCGAGGCCTTGGGCGATGCCGTGCCACTGGTTCGGGTCAAGACCCTTGAC GATGCCGTACAGCAGTGTGCCGAGCTGGCCCAGGCCGGCGATGCCGTGCTGCTGTCGCCAGCATGCGCCAGCCTCGACAT GTTCAAGAACTTCGAGGAACGGGGGCGCCTGTTCGCCCAGGCAGCGGGAGGCCTTGCATGA Protein sequence : MIASDQFRIVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELETLRRDYPQVEVRCGELDVDFLCRANELYVSPGLALA TPALQQAAARGVKLSGDIELFARHAKAPIIAISGSNAKSTVTTLVGEMAAKAGKRVAVGGNLGTPALDLLADDIELYVLE LSSFQLETTDQLNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRPCWTFGLNPPDFK AFGLREVDGEKYLAFEFQTLMPARELKVRGAHNQSNALAALALGHAAGLPFEPMLEALREFGGLAHRCQWVRERNGVNWY DDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAEFTALREPVKRFCRAVVLLGRDAERLAEALGDAVPLVRVKTLD DAVQQCAELAQAGDAVLLSPACASLDMFKNFEERGRLFAQAAGGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 8e-84 | 53 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 8e-84 | 53 |
