Gene Information

Name : rplS (PPUBIRD1_4094)
Accession : YP_005931881.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : protein RplS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4577093 - 4577443 bp
Length : 351 bp
Strand : -
Note : 50S ribosomal protein L19

DNA sequence :
ATGACCAACAAGATCATCCAGCAGCTCGAAGCCGAGCAGATGAGCAAGGAAATCCCGACCTTCGCACCAGGCGACACCGT
TGTCGTTCAGGTTAAAGTGAAGGAAGGTGAGCGTTCCCGTCTGCAGGCGTTCGAAGGCGTCGTTATCGCCAAGCGTAACC
GCGGTCTGAACAGCGCCTTCACCGTGCGCAAGATCTCCAGCGGCGTTGGCGTAGAGCGTACCTTCCAGACCTACAGCCCG
CAAATCGACAGCCTGGCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAA
AGCCGCTCGCATCAAGGAAAAACTGTCCTGA

Protein sequence :
MTNKIIQQLEAEQMSKEIPTFAPGDTVVVQVKVKEGERSRLQAFEGVVIAKRNRGLNSAFTVRKISSGVGVERTFQTYSP
QIDSLAVKRRGDVRKAKLYYLRDLSGKAARIKEKLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-34 70
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 6e-30 60