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Name : lysS (PPUBIRD1_4063) Accession : YP_005931850.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Virulence Product : LysS protein Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 4543052 - 4544554 bp Length : 1503 bp Strand : - Note : Lysyl-tRNA synthetase DNA sequence : ATGAGCGACCTCAAGACCGAATCGCAAGACCTGCAACAGGAAGAAAACGCCCTGATCGCCCTGCGCAAGGAAAAACTTGC CGCCGAGCGCGCCAAGGGCAATGCCTTCCCCAACGACTTCCGTCGCGACAGCTACTGCAACGACCTGCAGAAGCAGTATG CGGACAAGACCAAGGAAGAGCTGGAAGCAGCCGCGATCCCGGTCAAGGTCGCCGGCCGCATCATGCTCAACCGTGGTTCG TTCATGGTCATCCAGGACATGACTGGCCGTATTCAGGTCTACGTCAACCGCAAGACCCTGCCGGAAGAAACCCTGGCCGC GGTCAAGACCTGGGACCTGGGCGACATCATCAGCGCCGAAGGCACCCTGGCCCGTTCCGGCAAGGGCGACCTGTACGTCG AAATGACCAACGTGCGCCTGCTGACCAAGTCGCTGCGCCCGCTGCCCGACAAGCACCACGGCCTGACCGACACCGAGCAG CGCTACCGTCAGCGCTACGTCGACCTGATGGTCAACGAAGAAACCCGCCACACCTTCCGTGTGCGTTCGCAGGTGATCTC GCACATCCGCAAGTTCCTCATCGAGCGTGACTTCCTCGAAGTCGAGACGCCGATGCTGCAGACCATCCCGGGCGGCGCCG CTGCCAAGCCGTTCGAAACCCACCACAATGCCCTGGACATGGCCATGTTCCTGCGTATCGCGCCGGAGCTGTACCTCAAG CGTCTGGTGGTCGGTGGTTTTGAGAAAGTGTTCGAGATCAACCGCAACTTCCGTAACGAAGGCGTTTCGACTCGTCACAA CCCTGAATTCACCATGCTCGAGTTCTACCAGGCCTACGCCGACTACCGCGACAACATGGACCTCACCGAGGAACTGTTCC GCGAGCTGGCGCAACTGGTACTGGGCTCTACCGACGTACCGTACGGCGACAAGGTCTTCCACTTCGGCGAGCCGTTCGTA CGCCTGTCGGTGTTCGACTCGATCCTCAAGTACAACCCGGAGCTGACCGCCGCCGACCTGCAGGACGTCGACCGCGCCCG CGAGATTGCCAGGAAGGCCGGCGCCAAGGTGCTGGGCCATGAAGGCCTGGGCAAGCTGCAGGTGATGATTTTCGAAGAGC TGGTCGAGCACAAGCTGGAACAGCCGCACTTCATTACCGAGTACCCGTTCGAAGTGTCGCCGCTGGCCCGTCGCAACGAC GACAACCCGGCCGTTACCGACCGTTTCGAGCTGTTCATCGGTGGCCGCGAAATCGCCAACGCCTACTCCGAGCTCAACGA TGCCGAAGATCAGGCCGAGCGCTTCCTGGCCCAGGTGGCCGAGAAGGACGCGGGTGACGATGAAGCCATGCACTATGACG CCGACTTCGTTCGTGCGCTGGAGTACGGCATGCCGCCGACCGCCGGTGAAGGCATCGGCATCGACCGCCTGGTGATGCTG CTGACCAACTCGCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGA Protein sequence : MSDLKTESQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS FMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV RLSVFDSILKYNPELTAADLQDVDRAREIARKAGAKVLGHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRND DNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-138 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-78 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005931850.1 | LysS protein | VFG1668 | Protein | 5e-138 | 60 |
