Gene Information

Name : PPUBIRD1_0040 (PPUBIRD1_0040)
Accession : YP_005927955.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 40285 - 41034 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence :
ATGCTTCTTCAAGGCAAAGTCGCAATCATCACTGGCGCCGCATCGGCACGCGGGATCGGCCGGGCAACTGCGGCCACATT
CGCTGCTCAAGGTGCCCGCGTGGTGATCCTCGACCTGGATGAAGCCGCTGCCCGCGATGCCGCAGCGTCTCTTGGCGAAG
GACATCTCGGCCTAGCGGCCAACGTCGCCGATCAGGCACAGGTAAACCAGGCCGTTGCACAGATCATCGAGCACTATGGC
CGCATCGACGTGCTGGTCAACAACGCTGGCATCACCCAACCCCTCAAGACCCTGGACATCAAGCACAGCGACTACGACAA
GGTGCTCGACGTCAGCCTGCGCGGCACTCTGCTGATGTCTCAGGCCGTCATTCCCCTGATGCGCGAGCAACGTTCGGGCA
GCATTGTCTGCATGTCCTCGGTATCGGCACAGCGTGGCGGCGGCATCTTCGGTGGCCCGCACTACAGCGCAGCGAAAGCG
GGGGTACTGGGCCTGGCCAAGGCCATGGCACGAGAGCTGGGGCCGGATAACGTGCGCGTGAACGCCATCGCCCCGGGTCT
GATTCACACGGACATCACTGGCGGTTTGATGCAGGACGATCGTCGCCACGCAATCATCGACGGTATTCCACTGGGTCGTC
TGGGCGAAGCGCAAGACGTCGCTAACGCGGCATTGTTTCTGGCCAGCGATCTGTCGACCTACCTGACCGGAATCACCCTG
GATGTAAACGGCGGCATGCTCATTCACTGA

Protein sequence :
MLLQGKVAIITGAASARGIGRATAATFAAQGARVVILDLDEAAARDAAASLGEGHLGLAANVADQAQVNQAVAQIIEHYG
RIDVLVNNAGITQPLKTLDIKHSDYDKVLDVSLRGTLLMSQAVIPLMREQRSGSIVCMSSVSAQRGGGIFGGPHYSAAKA
GVLGLAKAMARELGPDNVRVNAIAPGLIHTDITGGLMQDDRRHAIIDGIPLGRLGEAQDVANAALFLASDLSTYLTGITL
DVNGGMLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 5e-69 89