Gene Information

Name : rdgC (PPUBIRD1_3915)
Accession : YP_005931705.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : RdgC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4391639 - 4392559 bp
Length : 921 bp
Strand : +
Note : Recombination-associated protein rdgC

DNA sequence :
ATGTGGTTCAAGAACCTGCTGACCTACCGCCTGACCCAGGAAGTTCCGTTCGAGCCTGAAGCGCTGGAAGCCGCCCTGGC
CAGCAAACCGGCCCGCCCCTGCGCCAGCCAGGAGCTGACCACTTATGGTTTCGTCGCGCCGTTCGGCAAAGGCGAAGACG
CTCCCCTGGTGCATGTCAGCGGCGAGTACTTGCTGATTGCCGCGCGCAAGGAAGAACGCATCCTGCCGAGCAGCGTGGTC
AACGACGCGGTCAAGGAAAAGGTCGAAGAGATCGAGACCGAGCAAATGCGCAAGGTCTATAAAAAGGAACGCGACCAGAT
CAAGGACGAAATCATCCAGGCGTTCCTGCCGCGTGCGTTCATCCGCCGCTCGATGATCTTCGCTGCCATTGCCCCGCGCC
TGGGCGTGATCCTGGTCAACTCGGCCAGCGCCAAGCGCGCCGAAGACCTGCTGTCGACCCTGCGCGAAGTGATGGGCTCG
CTGCCAGTGCGCCCGGCCACGGTGAAGATTGCGCCAGTGGCCACCATGACCGACTGGGTCAAATCGCAGCAAGCCGCCGA
AGGCTTCTATGTGCTGGACGAGTGCGAACTGCGCGACACCGCCGAAGATGGCGGTATCGTGCGCTGCAAGCGCCAGGACC
TCACCGGCGAAGAGATCCAGCTGCATCTGAGCACCGGCAAAGTGGTGACCCAGCTGGCCCTGGCCTGGCAAGACAAGCTG
TCGTTCATTCTCGACGACAAGATGGTCATCAAGCGCCTGAAGTTCGAAGAGCTGCTGCAGGAGCAGGCCGAGCAGGACGG
TGGCGATGAGGCTGCGCAACAGTTCGACGCCAGCTTCCAGCTGATGATGATGACCTTTGCCGAATTCCTGCCGGTGCTGT
TCGAGGCGCTGGGTGGGGAAGAGATTCCGCAAGGGGTCTGA

Protein sequence :
MWFKNLLTYRLTQEVPFEPEALEAALASKPARPCASQELTTYGFVAPFGKGEDAPLVHVSGEYLLIAARKEERILPSSVV
NDAVKEKVEEIETEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSMIFAAIAPRLGVILVNSASAKRAEDLLSTLREVMGS
LPVRPATVKIAPVATMTDWVKSQQAAEGFYVLDECELRDTAEDGGIVRCKRQDLTGEEIQLHLSTGKVVTQLALAWQDKL
SFILDDKMVIKRLKFEELLQEQAEQDGGDEAAQQFDASFQLMMMTFAEFLPVLFEALGGEEIPQGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 3e-54 41