Gene Information

Name : PPUBIRD1_3813 (PPUBIRD1_3813)
Accession : YP_005931606.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4262980 - 4263912 bp
Length : 933 bp
Strand : -
Note : -

DNA sequence : 
ATGAACCACCTCACGATTGCCAAAGAAGCCTTGATTGCCCAAGCACAAGCCGTTACCCAGCTGGCTGGACGTATTGATGG
CGAGTTTCAGAGCGCTGTGGAGCTTTTGCTCAGTTGTAAAGGTCGAGCCGTGGTCTGCGGTATGGGGAAATCGGGCCTTA
TCGGTAAGAAAATGGTTGCGACCTTTGCGTCTACCGGTACTCCCAGCTTCTTCCTGCACCCGGCAGAAGCATTTCATGGC
GATTTGGGTATGCTCAAGCCGATCGATGTACTGATCTTGATCAGCTATAGCGGTGAAACTGACGAGCTGATCAAATTGAT
CCCAAGTCTCAAATCGTTCGGTAACAAAATCATCGCAATGACCGGCAACGGAAATTCAACCTTAGCTAAACACGCCGATA
TTTGGCTTGATATTTCCGTTGAACGCGAGGTGTGCCCCAATAATCTGGCACCTACTACATCTACGTTGGCCACGATGGCA
ATGGGGGATGCTCTGGCTGTGGCTTTGATTGAAGCAATACAGTTTAAACCTATGGACTTTGCCCGCTATCACCCTGGCGG
TAGCCTTGGCCGAAAACTGTTGACCCGCGTTCGCGATGTAATGCATTCGCCTGCGCCTGTTGTATCTCCATCCACGAGCT
TCCATGATTGCTTGTTGGTAATGACGCGCAGCCGATTAGGTCTGACAGCGGTAATGGATGAAGACAAACTGGTCGGTATC
GTTACCGATGGTGATCTCCGTCGGGCTTTGGTGGAAGATGAGGGTGTGATACACGCCAATGTTGAGCTGTTCATGACTGC
TCATCCTCACACTATCAAGGAAGATGCACAGTTGTCTGAGGCGGAAGCTTATATGCTTGACAATAAAATTCGAGCGCTAG
CTGTGGTTGATGATCAGAACTCAGTAGTAGGCGTGGTCGAGATTTTTGACTAA

Protein sequence : 
MNHLTIAKEALIAQAQAVTQLAGRIDGEFQSAVELLLSCKGRAVVCGMGKSGLIGKKMVATFASTGTPSFFLHPAEAFHG
DLGMLKPIDVLILISYSGETDELIKLIPSLKSFGNKIIAMTGNGNSTLAKHADIWLDISVEREVCPNNLAPTTSTLATMA
MGDALAVALIEAIQFKPMDFARYHPGGSLGRKLLTRVRDVMHSPAPVVSPSTSFHDCLLVMTRSRLGLTAVMDEDKLVGI
VTDGDLRRALVEDEGVIHANVELFMTAHPHTIKEDAQLSEAEAYMLDNKIRALAVVDDQNSVVGVVEIFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-70 54
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 3e-70 54
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 1e-69 54