Gene Information

Name : PPUBIRD1_3743 (PPUBIRD1_3743)
Accession : YP_005931537.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : aminotransferase yfbQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4193846 - 4195057 bp
Length : 1212 bp
Strand : +
Note : -

DNA sequence :
ATGCAGTTCAGCAAATCGAACAAGCTCGCCAATGTCTGCTACGACATTCGCGGCCCAGTGCTCAAGCACGCCAAACGCCT
GGAGGAGGAAGGCCACCGCATCCTCAAGCTGAACATCGGCAACCCGGCGCCGTTTGGCTTCGAGGCGCCTGATGAAATCC
TTCAGGATGTGATCCGCAACCTGCCCACCGCACAGGGCTACAGCGACTCCAAGGGCCTGTTCAGCGCACGCAAGGCCGTG
ATGCAGTACTGCCAGCAGAAGGAAATCGAAGGCGTCACCATCGAGGACATCTACCTGGGTAATGGTGTGTCCGAGCTGAT
CGTCATGTCGATGCAGGCGCTGCTCAACAACGGCGACGAAGTACTGATCCCGGCCCCCGACTACCCGCTGTGGACAGCCG
CCGTGAGCCTGGCCGGCGGCAAGCCGGTGCACTACCTGTGCGACGAGCAGGCCGACTGGTTCCCTGACCTTGAGGACATC
AAGGCCAAGATCACCCCGAACACCAAGGCGCTGGTGATCATCAACCCGAACAACCCGACCGGCGCCGTCTACTCCAAAGA
GCTGCTGCTGGGCATGCTGGAGCTGGCCCGCCAGCACAACCTGGTGGTGTTCTCCGACGAGATCTACGACAAGATCCTGT
ACGACGAAGCCGTGCACATCAGCACCGCCTCGCTGGCCCCGGACCTGCTGTGCCTGACCTTCAACGGCTTGTCCAAATCG
TACCGGGTAGCGGGTTTCCGCTCCGGCTGGCTGATCATCTCCGGGCCCAAGCACCACGCACAAAGCTACATCGAAGGCAT
CGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAGCATGCCATCCAGACCGCGCTGGGCGGCTACCAGA
GCATCAACGACCTGGTGCTACCGCCAGGCCGCCTGCTGGAGCAGCGTAACCGCACCTACGAACTGCTCAACGATATCCCC
GGTGTCAGCTGCGTGAAGCCGATGGGGGCGCTGTATGCGTTCCCGCGGATCGATCCGAAGGTTTGCCCGATCCTCAACGA
CGAGAAGTTCGCCCTTGACCTGCTGCTGTCAGAGAAGCTGCTGATTGTACAAGGGACGGCGTTCAACTGGCCGTGGCCGG
ACCACTTCCGCGTGGTGACCTTGCCGCGCGTGGATGACCTGGAAGCAGCAATTGGCCGGATCGGCAATTTCCTGAAGGGT
TATTCGCAGTAG

Protein sequence :
MQFSKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPDEILQDVIRNLPTAQGYSDSKGLFSARKAV
MQYCQQKEIEGVTIEDIYLGNGVSELIVMSMQALLNNGDEVLIPAPDYPLWTAAVSLAGGKPVHYLCDEQADWFPDLEDI
KAKITPNTKALVIINPNNPTGAVYSKELLLGMLELARQHNLVVFSDEIYDKILYDEAVHISTASLAPDLLCLTFNGLSKS
YRVAGFRSGWLIISGPKHHAQSYIEGIDMLANMRLCANVPAQHAIQTALGGYQSINDLVLPPGRLLEQRNRTYELLNDIP
GVSCVKPMGALYAFPRIDPKVCPILNDEKFALDLLLSEKLLIVQGTAFNWPWPDHFRVVTLPRVDDLEAAIGRIGNFLKG
YSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-127 64
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-127 64
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 1e-127 64
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-127 64