Gene Information

Name : PPUBIRD1_3722 (PPUBIRD1_3722)
Accession : YP_005931516.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 4172714 - 4173478 bp
Length : 765 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCTTGAATTTACGGTTGTAATCCCCGCCCGGCTGCGCTCCACCCGCCTGCCAGGCAAACCGCTGCTGCTGATTGC
CGGCAAGCCGATGGTGCAACATGTGTGGGAGCAGGCCCGCAAGAGCGGTGCCAGCCGTGTGGTCATCGCCACCGACGACA
CCAGCATCCTCGAAGCCTGCCAGGCCTTCGGCGCCGAAGTGCTGATGACCCGTGCCGATCATGAATCGGGCACTGACCGT
CTGGCCGAAGTGGCCGCGTATCTCGGTTTGCCGGCTGACGCCATCGTGGTCAACGTGCAGGGCGACGAGCCGCTGATCCC
GCCGGTGATCATCGATCAGGTGGCGGCCAACCTGGCTGCGCATCCGGAAGCGGGCATCGCCACCTTGGCCGAGCCGATCC
ATGAGCCGGAAACCGTGTTCAACCCTAACGCGGTCAAGGTGGTGAGTGACAAGAACGGCCTGGCCCTGACGTTCAGCCGA
GCGCCGCTGCCCTGGGCCCGCGATACCTTTGCCAAGGCCCGCAACGTGCTGCCGGTAGGGGTGCCATATCGCCGCCATAT
TGGCATGTACGCCTACCGTGTCGGCTTCCTGCACGACTTCGTCAGCTGGGGCCCATGCTGGCTTGAGCAGGCTGAAGCGC
TGGAGCAGCTGCGTGCCCTGTGGCACGGCGTGCGCATTCACATCGAGGACGCCATCGAGGCACCTGCCGTGGGTGTCGAT
ACCCCTGAGGATCTGGAGCGCGTAAGGCGCTTGCTGGAGGCCTGA

Protein sequence :
MSLEFTVVIPARLRSTRLPGKPLLLIAGKPMVQHVWEQARKSGASRVVIATDDTSILEACQAFGAEVLMTRADHESGTDR
LAEVAAYLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSR
APLPWARDTFAKARNVLPVGVPYRRHIGMYAYRVGFLHDFVSWGPCWLEQAEALEQLRALWHGVRIHIEDAIEAPAVGVD
TPEDLERVRRLLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-38 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-38 45
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-38 45