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Name : PPUBIRD1_3540 (PPUBIRD1_3540) Accession : YP_005931338.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : - COG ID : - EC number : - Position : 3960535 - 3962100 bp Length : 1566 bp Strand : + Note : - DNA sequence : ATGCGTAACAACCAGCCGATTACCCAGAGAGAACGGACTTTCCCTGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAA GGGTGTGGTCACTTACTGCAACGATGCCTTTATCGAAATCAGTGGATTCACCCGCGAGGAGCTGACTGGCGCACCGCACA ACCTGGTGCGCCACCCCGACGTACCGCCTGCCGTGTTTGCCCATATGTGGCAAACCCTCAAGCAGGGCCAGCCGTGGATG GGTATCGTCAAGAACCGCTGCAAGTCCGGCGACCATTACTGGGTCAACGCCTATGTCACCCCCATCTTCGATAACAACCA GGTTGTCGGCTTCGAGTCGGTGCGGGTCAAGCCCACCGCCGAGCAGATCCGCCGCGCCGAGGCCCTGTACCAGCGCATCA ACCAGGGCAAGCCGCCGGTACCGCGCCGCGACAAGTGGCTGCCAGTGCTGCAGGACTGGCTACCGTTCATCTTGATCAGC CAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGG CCTGCTCGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAAACCACTTCCGACCCACTGA TCGCGCAGATGTACACCGACAGCCGTGGCGTGCAGGCGCGCCTGGAAATGGCCATGCTCAGCCAGGACGCACGCATGAAA ACCTGCCTGACGCGGCTACAAGACAGTGCCGAACACCTGAGCGACCAGGCACGCCAGTCCGATGCCTTGGCGCACAAGAG CTCTTCTGGGCTGGAGCGCCAGCGGGTGGAGACCGAGCAAGTCGCCGCCGCAGTAAACCAGATGGCCGCCACCACTCAGG AAGTGGCCAACCATGTACAGCGCACCGCCGATGCCACCCAGGAAGCCAACCGGCTGACCAGCCAGGGCCGGCAGATTGCC GGAGAAACCCGCGAGGCCATCGAGCGCCTGTCGGCGGCAGTGGGCGAGACCGGCCAGACGGTTACGCAACTGGCCAAAGA CAGCGACGAGATTGGTGGCGTGGTCGACGTGATCAAGGGCATCGCCGACCAGACCAACCTGCTGGCGCTTAACGCAGCCA TTGAAGCGGCGCGCGCAGGTGAAATGGGCCGTGGCTTTGCAGTGGTGGCTGATGAAGTGCGTCAGTTGGCCCAGCGCACC GCCGAATCCACCGGGCAGATCCACGGCCTGATCGCCAAACTGCAACAGACCGCCAGCAACGCAGTGCTGACCATGGAAAC CGGCCACCGTCAGGCACAGGAAGGCGTCGATCGGGTAATGCAGGCCGACGAGGCGCTGGTAGGCATCAGCGAAGCGGTGG CCAATATCACCGACATGGCCACCCAGATTGCAGCTGCAACCGAGGAGCAGACCGCAGTGGCTGACGAGATCAGCCGCAAC ATCAGCACCATTGCCGAACTGGCCGACCAGACCGCGGAACAGGCGCAGCACTCGGCACTGCTGAGCGAAGAACTGACCAG CACGGCGGGCAGCCAGTATTCGCTGGTAGAGCGCTTCAACCGCTGA Protein sequence : MRNNQPITQRERTFPAQQRLISTTNAKGVVTYCNDAFIEISGFTREELTGAPHNLVRHPDVPPAVFAHMWQTLKQGQPWM GIVKNRCKSGDHYWVNAYVTPIFDNNQVVGFESVRVKPTAEQIRRAEALYQRINQGKPPVPRRDKWLPVLQDWLPFILIS QVGFLIGNWLGHSWGFALAAGLSVPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGVQARLEMAMLSQDARMK TCLTRLQDSAEHLSDQARQSDALAHKSSSGLERQRVETEQVAAAVNQMAATTQEVANHVQRTADATQEANRLTSQGRQIA GETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT AESTGQIHGLIAKLQQTASNAVLTMETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVADEISRN ISTIAELADQTAEQAQHSALLSEELTSTAGSQYSLVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 6e-68 | 41 |
