Gene Information

Name : PPUBIRD1_3368 (PPUBIRD1_3368)
Accession : YP_005931168.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3764612 - 3765298 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCCCCAGCATTCTCGTTGCGCAGAACCTTAGCAAAGTGGTCCCCAGCGCGGAAGGTGACCTTACCATCCTCCACGC
ACTGTCTCTCGACCTGGCCCAAGGCGACAGCCTGGCCATCGTCGGCGCCTCGGGCTCTGGCAAGTCGACCCTGCTCGGTT
TGCTCGCCGGCCTCGACCGGCCCAGCGCTGGCAGCGTCATGCTCGCCGGCCACGACCTGGGGCCACTGGATGAAGACCAG
CGTGCCCGTGTGCGAGCCGAACATGTGGGTTTCGTGTTCCAGTCGTTCCAGTTGCTCGACAGCCTCAATGCACTGGAAAA
CGTCATGCTGCCACTGGAACTGGACGGCCGCCGCGATGCCCGCGAACAGGCTCGCACTTTGCTGGAGCGGGTCGGCCTGG
GCAAGCGCCTGAGCCACACACCTCGGCAGCTGTCGGGCGGCGAGCAGCAGCGCGTGGCAATCGCCCGCGCCTTCGCCGCG
CAGCCTGCGGTGCTATTCGCCGATGAACCCACCGGCAACCTCGACAGCCACACCGGCGAACGCATAAGCGACTTGTTGTT
CGAGCTGAACAAGGAGCGCGGCACTACCTTGGTGCTGGTCACCCATGACGAACGCCTGGCCCGCCGCTGCCGGCGCCAGA
TCCGCCTGGACGCGGGCCGCCTTGTGGCGCCGATGGAGGCCCGGTGA

Protein sequence : 
MSPSILVAQNLSKVVPSAEGDLTILHALSLDLAQGDSLAIVGASGSGKSTLLGLLAGLDRPSAGSVMLAGHDLGPLDEDQ
RARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRRDAREQARTLLERVGLGKRLSHTPRQLSGGEQQRVAIARAFAA
QPAVLFADEPTGNLDSHTGERISDLLFELNKERGTTLVLVTHDERLARRCRRQIRLDAGRLVAPMEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPUBIRD1_3368 YP_005931168.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-30 51
PPUBIRD1_3368 YP_005931168.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-32 47