Gene Information

Name : PPUBIRD1_3088 (PPUBIRD1_3088)
Accession : YP_005930900.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Virulence
Product : Ferric siderophore ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3469263 - 3470039 bp
Length : 777 bp
Strand : +
Note : -

DNA sequence : 
ATGATTACTGTCCACGACCTGCATAAAACCTATGGCAGCAAAGAGGTGTTGAGCGGGGTAAGCGCCAGCTTCCCGCGCGG
GCAGCTGACCTCGCTGATCGGCCCCAATGGCGCCGGCAAGACCACCCTGCTGATGATGCTGGCCCGGCTGCTGGCGCCTG
CCAGCGGTGACATACGCCTGGACGGGCAAAGCATCGACAGCATCGCCATCGGCGACTATGCCCGGCGCGTGGCCACCCTG
CGCCAGTCGGTCGACTTCAACCTGCGCCTGACCGTCGACGAACTGGTCGCGTTCGGCCGCTTCCCCTACAGCCGTGGTGC
GCTCACCGCTGCAGACCGTCGGGCCATCGACCAGGCCATTGCCTTTCTGTCCCTGGAGCCGCTGCGCCAGGCCTACCTCG
ATGAACTCAGCGGCGGCCAGCGGCAAATGGCCTTTCTGGCCATGACCATCGCCCAACAGACCGACTATCTGCTGCTGGAC
GAGCCGTTGAACAACCTCGACATGCGCCACGCCGTGCAGATCATGCGCGCCCTGCGTCGGCTGTGCGACGAGTTCGGCCG
CACGGTGATTTTGGTGGTGCACGACATCAACTTTGCAGCCGCCTACTCCGACTGCATCGTCGCCATGCAGGGTGGCCGTG
TGCATTGCAGCGGCAGCGTCGAGCAGGTTGTGACCGAGCGACAGCTGCACGCGCTGTACGGGCTGGATTTCGACATCACC
CACAGCGCGCGCGGCCGCCTGTGCAACTACTTCAACCCACCCGGAGAACAGCAATGA

Protein sequence : 
MITVHDLHKTYGSKEVLSGVSASFPRGQLTSLIGPNGAGKTTLLMMLARLLAPASGDIRLDGQSIDSIAIGDYARRVATL
RQSVDFNLRLTVDELVAFGRFPYSRGALTAADRRAIDQAIAFLSLEPLRQAYLDELSGGQRQMAFLAMTIAQQTDYLLLD
EPLNNLDMRHAVQIMRALRRLCDEFGRTVILVVHDINFAAAYSDCIVAMQGGRVHCSGSVEQVVTERQLHALYGLDFDIT
HSARGRLCNYFNPPGEQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPUBIRD1_3088 YP_005930900.1 Ferric siderophore ABC transporter, ATP-binding protein BAC0164 Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPUBIRD1_3088 YP_005930900.1 Ferric siderophore ABC transporter, ATP-binding protein VFG1042 Protein 4e-27 41