Gene Information

Name : PPUBIRD1_3066 (PPUBIRD1_3066)
Accession : YP_005930879.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3441255 - 3441758 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTAAAAATACGGGATCCGTTGCGCCGAAAGAACGCGTCAATATCAAGTATGTCCCCGCTACCAGCGATGAGCAGGC
TGAGGTGGAGCTGCCGCACAAGATGCTGGTGCTGGGCGACTTCGGCCTGGATGACAACCGGGCGCTTGAGGACCGTCAGG
TCATGCGCATCGATAAACATACATTCAACAGCGTGTTGAACGACGCCAACGTGAGCCTGGACGTAAAGGTACCGTCCAGG
CTCGGCACCGCCCCGGATACCGAACTGGCCGTCCACCTGCAGTTCAGGTCCATCAACGATTTCGGGCCGGACCGGATCGC
GCGCCAGGTGCCCGAGCTGAACAAGCTGCTGGCGCTGCGCGAAGCACTGGTCGCCCTGAAAGGCCCGCTGGGTAACGTCC
CGGCCTTCCGCAAGCAATTGCAGCACCTGCTTAACAACGAGCAGGCGCGTAAGCAGCTCGCCCAAGAACTGGACCTGGTG
CTAGAGGCGCCAGAACAAGATTGA

Protein sequence : 
MSKNTGSVAPKERVNIKYVPATSDEQAEVELPHKMLVLGDFGLDDNRALEDRQVMRIDKHTFNSVLNDANVSLDVKVPSR
LGTAPDTELAVHLQFRSINDFGPDRIARQVPELNKLLALREALVALKGPLGNVPAFRKQLQHLLNNEQARKQLAQELDLV
LEAPEQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 3e-33 48
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-36 47
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 5e-36 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPUBIRD1_3066 YP_005930879.1 hypothetical protein VFG2092 Protein 7e-43 56
PPUBIRD1_3066 YP_005930879.1 hypothetical protein VFG2474 Protein 1e-33 50