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Name : PPUBIRD1_2959 (PPUBIRD1_2959) Accession : YP_005930776.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Virulence Product : DNA-binding response regulator Function : - COG functional category : - COG ID : - EC number : - Position : 3316499 - 3317161 bp Length : 663 bp Strand : - Note : - DNA sequence : ATGCGGCTGTTGCTGGTTGAGGATGACATCGCGCTGGGTGAAGGGATCTGCGACGGCTTGCGCCAGGAGGGGTACACCCT CGACTGGTTGCGTGACGGTGTCGGTGGCTTGCATGCGCTGCAACACGAGACCTTCGACCTGCTGATCCTGGATCTTGGAT TGCCCCGTATGGATGGCCTCGAGCTACTCAGGCGTTTACGCGCCGGCGGCGACAGCTTGCCGGTGCTGATCCTTACCGCG CGGGATGCCCTCGATGATCGCATTGCCGGCCTGGATGCCGGTGCCGATGACTACCTGGTCAAGCCTTTCGACCTCAACGA GCTCAAGGCACGCTTGCGCGCCTTGCTGCGGCGCAGCGTCGGGCGCGCCAAGGTGCTGATCGAGCATGCCGGGGTCAGTC TGGATCCGACCACCCAGCAAGTGCAATACAACGGCGTCGAGGTTGTACTCACCCCCAAAGAGTATGTGCTGCTGCATGAG TTGCTGGCACAGCCCGGCAAGGTATTCACACGTGAGCGCCTGACTCAACTGCTGTATGGCTGGGATGAAGAGCCGGAGAG CAACACGCTGGAGGTAAACATCTACCACCTGCGCAAGAAGCTGTTCAACGGCCTGATTCGCACGGTGCGCGGCATTGGCT ATCTGGTCGAGGTCAAGGCATGA Protein sequence : MRLLLVEDDIALGEGICDGLRQEGYTLDWLRDGVGGLHALQHETFDLLILDLGLPRMDGLELLRRLRAGGDSLPVLILTA RDALDDRIAGLDAGADDYLVKPFDLNELKARLRALLRRSVGRAKVLIEHAGVSLDPTTQQVQYNGVEVVLTPKEYVLLHE LLAQPGKVFTRERLTQLLYGWDEEPESNTLEVNIYHLRKKLFNGLIRTVRGIGYLVEVKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 2e-30 | 46 |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 3e-24 | 43 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 2e-23 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | BAC0487 | Protein | 4e-30 | 49 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | NC_002516.2.879194.p | Protein | 2e-24 | 45 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | BAC0197 | Protein | 7e-28 | 43 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | NC_003923.1003417.p0 | Protein | 4e-21 | 41 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | NC_013450.8614146.p0 | Protein | 4e-21 | 41 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | NC_002951.3238224.p0 | Protein | 4e-21 | 41 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | NC_007793.3914065.p0 | Protein | 4e-21 | 41 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | NC_002758.1121390.p0 | Protein | 4e-21 | 41 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | NC_010079.5776364.p0 | Protein | 4e-21 | 41 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | NC_002952.2859858.p0 | Protein | 4e-21 | 41 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | NC_007622.3794948.p0 | Protein | 4e-21 | 41 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | BAC0308 | Protein | 3e-26 | 41 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | Y16952.3.orf35.gene. | Protein | 6e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | VFG0473 | Protein | 3e-34 | 49 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | VFG0596 | Protein | 1e-24 | 43 |
| PPUBIRD1_2959 | YP_005930776.1 | DNA-binding response regulator | VFG1390 | Protein | 2e-29 | 43 |
