Gene Information

Name : PPUBIRD1_2954 (PPUBIRD1_2954)
Accession : YP_005930771.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Resistance
Product : Regulatory protein, ArsR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3312259 - 3312606 bp
Length : 348 bp
Strand : +
Note : -

DNA sequence : 
ATGATCACACCGCCCGATGTCTTCAAGAGCCTCTCTGACGAAACCCGCGCTCGCGCCACTCTGCTTATCGCCAGCCTGGG
CGAACTGTGCGTCTGCGAACTGATGTGCGCGCTCAACGACAGCCAACCCAAGATCAGTCGCCATCTGGCACAACTGCGCA
GCAATGGCATGCTGCTGGACCGCCGTCAGGGCCAGTGGGTGTATTACCGCCTGAATCCGGAGCTGCCTTCCTGGGTTCAC
GAAGTGCTTCAGGTCACCTTGCAGGCCAATTCGCAATGGCTGGCTGACAATGCCCTTCGGCTGAAGAACATGGACGGTCG
CCCCGTGCGTGATTCCGTCTGCTGCTGA

Protein sequence : 
MITPPDVFKSLSDETRARATLLIASLGELCVCELMCALNDSQPKISRHLAQLRSNGMLLDRRQGQWVYYRLNPELPSWVH
EVLQVTLQANSQWLADNALRLKNMDGRPVRDSVCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsR CAJ77018.1 arsenite inducible repressor Not tested AbaR1 Protein 6e-19 57
arsR AFC76435.1 ArsR Not tested AbaR5 Protein 8e-19 57
arsR2 YP_001007630.1 DNA-binding transcriptional repressor ArsR Not tested YAPI Protein 6e-21 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPUBIRD1_2954 YP_005930771.1 Regulatory protein, ArsR BAC0589 Protein 3e-21 53
PPUBIRD1_2954 YP_005930771.1 Regulatory protein, ArsR BAC0591 Protein 3e-20 52
PPUBIRD1_2954 YP_005930771.1 Regulatory protein, ArsR BAC0588 Protein 9e-19 50