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Name : PPUBIRD1_0271 (PPUBIRD1_0271) Accession : YP_005928180.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : S1 RNA-binding domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 317744 - 320068 bp Length : 2325 bp Strand : - Note : - DNA sequence : ATGGACAGCATCAACAGCCGTATCGCCGAGGAACTGGGCGTACGCCCGCAGCAGGTCGAGGCGGCCGTGAGCCTGTTGGA CGAAGGCTCGACCGTGCCCTTCATCGCTCGCTACCGCAAGGAAGTGACCGGTAGCCTTGACGACACTCAGTTGCGCCACC TGGAAGAGCGCCTGCGCTACCTGCGCGAACTCGACGAGCGCCGCGCCAGCATCCTTTCCAGCATCGAGGAACAGGGCAAG CTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCA GAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCC TGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCGCGCTGGAAGGCGCC AAGTACATCCTGATGGAACGCTTTGCCGAAGACGCCGCCCTGCTCGACAAGCTGCGCAGCTACCTCAAGCAGGAAGCCGT GCTCAGCGCCCGCGTCGTGGCCGGCAAGGAAGAAGAAGGCGCCAAGTTCCGCGACTATTTCGCTCATGACGAGCTGCTGC GTACTGCGCCATCGCACCGTGCCCTGGCGATCTTCCGCGGGCGCAACGAAGGCGTGTTGAGCGTCTCGCTGAAGGTCGGC GAAGAACTGCCCGGCACCCTGCACCCGTGCGAGCTGATGATCGGCAACCACGTCGGCATCGAGAACCGCAGCCGGCCGGC CGACAAGTGGCTGGGTGAAGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTACACCCACCTGGAGACCGACCTGTTCGGCG AGCTGCGTGACAATGCCGAAGGCGAGGCGATCAACGTGTTCGCCCACAACCTGCACGATCTGCTGCTGGCCGCCCCGGCC GGCCCGCGCGCCACCCTGGGCTTCGACCCGGGCCTGCGCACCGGCTGCAAGATCGCCGTGGTCGACGCAACCGGCAAACT GCTGGACCACACCACGGTCTACCCGCACGCGCCGAAGAACGACTGGGACCGCACCATTTCCATCATGGCCGCACTGTGCG CCAAACACTCGGTGGAGCTGATCGCCATCGGCAACGGTACCGCCAGCCGCGAAAGCGACAAGCTGGTGGCCGAGCTGGTC AAGAAATATCCAGCCCTGAAAATCACCAAGATCATGGTCTCCGAAGCCGGTGCTTCGGTGTACTCGGCATCGGAACTGGC CGCCCGCGAGTTCCCAGACCTGGACGTGTCGATCCGCGGCGCCGTGTCGATCGCCCGGCGCCTGCAGGATCCGCTGGCCG AACTGGTGAAGATCGATCCGAAATCCATCGGTGTCGGCCAGTACCAGCACGACGTGTCCCAGCTGAAACTGGCACGTGGC CTGGACGCGGTGGTCGAGGATTGTGTGAACGCCGTGGGCGTGGACGTGAACACCGCTTCGGTGGCGCTGCTGACGCGCAT CTCCGGCCTCAATGCCACCCTGGCACAGAACATCGTCGCCCACCGCGATGCCAATGGTCCGTTTGCCACCCGGGCAGCAC TGAAAAAGGTCAGCCGCCTGGGTGAGAAAACTTTCGAGCAGGCCGCCGGCTTCCTGCGCGTGATGAACGGCGACAACCCG CTGGACGCCTCTGCGGTGCACCCTGAGGCTTACCCGCTGGTGCAGCGCATTGCTGCCGATACCGACCGCGACATCCGCTC GCTGATTGGTGACAGCAGCTTCCTCAAGCGCCTGGACCCGAAAAAGTTCACCGACGAAACCTTCGGCCTGCCAACCGTCA CCGACATCCTGCAAGAGCTGGACAAGCCCGGCCGCGACCCGCGTCCGGAGTTCAAGACCGCCACCTTCCAGGACGGCGTC GAAGACCTCAAGGACCTGGAACCGGGCATGATCCTCGAAGGCGTGGTGACCAACGTTACCAACTTCGGCGCCTTCGTCGA CATCGGCGTGCACCAGGACGGCCTGGTGCATATCTCGGCGCTGTCGGAGAAGTTCGTCAAAGACCCGCGTGAAGCGGTCA AGGCCGGCGATGTGGTCAAGGTCAAGGTCATGGAAGTGGACATCCCGCGCAAACGCGTCGGCCTGTCCATGCGCATGAGC GACACCCCGGGCGAGAAGGTCGAAGGCAACCGCGGTGGTAATCGTGGCAATGGCGGCAATCGCCAGCCGCAGGCACCGCG CCAGCGTGAAACCGCCACGGCTGCGCCGGCCAACAATGCCATGGCCTCGCTGTTCGCCAACGCCAAGCAACTGAAGAAGA AGTAA Protein sequence : MDSINSRIAEELGVRPQQVEAAVSLLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRASILSSIEEQGK LTPELAREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADGLFNDPTLAPESEAARFVNAEKGVADVKAALEGA KYILMERFAEDAALLDKLRSYLKQEAVLSARVVAGKEEEGAKFRDYFAHDELLRTAPSHRALAIFRGRNEGVLSVSLKVG EELPGTLHPCELMIGNHVGIENRSRPADKWLGEVVRWTWKVKLYTHLETDLFGELRDNAEGEAINVFAHNLHDLLLAAPA GPRATLGFDPGLRTGCKIAVVDATGKLLDHTTVYPHAPKNDWDRTISIMAALCAKHSVELIAIGNGTASRESDKLVAELV KKYPALKITKIMVSEAGASVYSASELAAREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG LDAVVEDCVNAVGVDVNTASVALLTRISGLNATLAQNIVAHRDANGPFATRAALKKVSRLGEKTFEQAAGFLRVMNGDNP LDASAVHPEAYPLVQRIAADTDRDIRSLIGDSSFLKRLDPKKFTDETFGLPTVTDILQELDKPGRDPRPEFKTATFQDGV EDLKDLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS DTPGEKVEGNRGGNRGNGGNRQPQAPRQRETATAAPANNAMASLFANAKQLKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 63 |
