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Name : PPUBIRD1_2745 (PPUBIRD1_2745) Accession : YP_005930571.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : - COG ID : - EC number : - Position : 3106455 - 3107774 bp Length : 1320 bp Strand : - Note : - DNA sequence : ATGATCTCGTCGTATGGGGCGTTGTGCGTTACAGCGTTCGCGACCATGCGCAGTGATCACGTTTTCGCACTCATTGATTG CAACTCGTTTTACGCGAGCTGCGAGCGTGTATTCCGGCCCGACCTAACCAAGACCCCGATCGTTGTGCTGAGCAACAACG ATGGGTGCGTGATTGCCAGGTCTTACGACGCCAAGCCATTCGTGAAGATGGGCGAGCCGTACTTCCAGGCGAAGGACAAG CTGCGCCGGCACGGTATCATGGCCTTCAGCAGTAATTACGCGCTTTACGGCGATATGAGCGAGCGCGTCATGTCGCTTAT CGAGTCGATGGTGCCTGCCACCGAGATCTACAGCATCGACGAGTGCTTCGCTGATCTGTCCGGTATACAGGAAAACTTGA CCCAGTTCGGGCGAAAGCTGAGGTCCAGGATCTTCCAGTGCACTGGCATACCAGTAGGGGTTGGGATCGCCGGCACAAAG ACCCTGGCCAAGCTGGCCAATCACACGGCCAAGCGCCTGCAGGCCCAGACCGGCGGCGTGGTCGACATCACCGATCCGTT CAAGCGAGATTGGGTGCTACGCAATACCGAGGTGAAAGAGGTGTGGGGAGTTGGCCGCCGTATGACTGCCCACCTTGAAG CGATGGGCATTCACACGGCGATGGATCTGGCCAAGGCTGATGCCTGGACGCTGCGACAGAAATTCAGTGTGGTGGTAGAG AAGACTGCCCGCGAACTGGCTGGAACGCCTTGCCTGGAGCTGGACGAGGCCGAGCCCCCGAAGCAGGAAATCTGCTGCAG CCGGATGTTCGGCAAGCGGCTGACTGAGCTAGCGCCGATCAAGCAGGCAGTGGCCACGTACGTTGGCCGAGCAGCGGAAA AACTTCGGGCCCAGGGTTCAGTGTGCAAGCGCATGCGCGTCAGCATCCGTACCGGCATGTTCAACCCGGATGAGGCGCAC CACGCCCAAGGGGCATTGGTAGAACTGCCATACCCCACCTGCGACACGCTGCTGATGACCAGGCTGGCGACCGACGCGGT TGGCCGGATCTTCAGGCCAGGGTTTCGATACAGCAAGGCAGAGGTGCTGTTGATGGATCTGCGGCAACCGGGCGAATTTT CAGAGGATTTGTTCGCGCTCGAGCAATCGGTGGCATGTGACCGACTTATGCAGGTGATGGATCACATAAACGAGCGCTGG GGGAGGGGGACAATGCGGGCCGCCAGTGTGCCGGCGACACCGGACTGGGGCATGCGAAGGGAGATGATGAGTCAATCCTA TACGACGCGGATAGATCAACTGTGGACGGTCAAATGTTAA Protein sequence : MISSYGALCVTAFATMRSDHVFALIDCNSFYASCERVFRPDLTKTPIVVLSNNDGCVIARSYDAKPFVKMGEPYFQAKDK LRRHGIMAFSSNYALYGDMSERVMSLIESMVPATEIYSIDECFADLSGIQENLTQFGRKLRSRIFQCTGIPVGVGIAGTK TLAKLANHTAKRLQAQTGGVVDITDPFKRDWVLRNTEVKEVWGVGRRMTAHLEAMGIHTAMDLAKADAWTLRQKFSVVVE KTARELAGTPCLELDEAEPPKQEICCSRMFGKRLTELAPIKQAVATYVGRAAEKLRAQGSVCKRMRVSIRTGMFNPDEAH HAQGALVELPYPTCDTLLMTRLATDAVGRIFRPGFRYSKAEVLLMDLRQPGEFSEDLFALEQSVACDRLMQVMDHINERW GRGTMRAASVPATPDWGMRREMMSQSYTTRIDQLWTVKC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 4e-162 | 76 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 5e-121 | 68 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 5e-78 | 46 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 5e-78 | 46 |
