Gene Information

Name : ssuB (PPUBIRD1_0266)
Accession : YP_005928175.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Resistance
Product : protein SsuB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 313800 - 314612 bp
Length : 813 bp
Strand : +
Note : Aliphatic sulfonates import ATP-binding protein ssuB

DNA sequence : 
ATGACCGTGCTCAAGGAACAGCCGCCACGCCTGCTGCGTGGCACCCCGCTGGCCTCCAAGGGCCTGCGCAAGACCTTTGG
CCAGCGCGAAGTTTTGAAGGGTATCGACCTGCACATTCCGGCCGGCCAGTTCGTGGCCATCGTCGGCCGCAGCGGCTGCG
GCAAGAGCACTTTGCTGCGGCTGCTGGCCGGGCTGGACCAACCCTCCGCCGGGCAGCTGCTGGCCGGTGCTGCGCCGCTG
GAGGAGGCCCGTGAAGAAACCCGCCTGATGTTCCAGGACGCGCGGCTGCTGCCGTGGAAGAAGGTGATCGACAACGTTGG
CCTTGGGCTGTCTGGCGACTGGCGCCCGCGTGCGCTGGAGGCCTTGGATGCGGTTGGCCTGGCAGACCGCGCCAACGAAT
GGCCGGCAGCGCTCTCGGGAGGCCAGAAACAGCGCGTGGCTTTGGCCCGAGCCTTGATTCACCAGCCCCGCCTGCTGCTG
CTGGACGAGCCACTGGGGGCGCTGGATGCATTGACCCGTATCGAGATGCAGCAACTGATCGAACGCCTGTGGCGTCAGCA
CGGCTTCACTGTGCTGCTGGTCACCCACGACGTCAGCGAGGCGGTTGCCGTGGCGGATCGGGTGATTCTGATCGAGGACG
GCGAGGTCGGGCTCGACCTCACTGTTGACCTGGCACGGCCCCGGGCGCGGGGTTCGCACCGTCTGGCCGCGCTGGAAAGC
GAAGTGCTCAACCGTGTTCTGTCCACCCCGGGCACTGCGCCCGAGCCGGATCCTGTAGCCCCTCTGCCCACGCAGCTGCG
TTGGGCGCATTGA

Protein sequence : 
MTVLKEQPPRLLRGTPLASKGLRKTFGQREVLKGIDLHIPAGQFVAIVGRSGCGKSTLLRLLAGLDQPSAGQLLAGAAPL
EEAREETRLMFQDARLLPWKKVIDNVGLGLSGDWRPRALEALDAVGLADRANEWPAALSGGQKQRVALARALIHQPRLLL
LDEPLGALDALTRIEMQQLIERLWRQHGFTVLLVTHDVSEAVAVADRVILIEDGEVGLDLTVDLARPRARGSHRLAALES
EVLNRVLSTPGTAPEPDPVAPLPTQLRWAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-37 47
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-23 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_005928175.1 protein SsuB NC_012469.1.7686878. Protein 4e-21 41