Gene Information

Name : xcpT (PPUBIRD1_2365)
Accession : YP_005930202.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Virulence
Product : XcpT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2700409 - 2700834 bp
Length : 426 bp
Strand : -
Note : general secretion pathway protein G

DNA sequence :
ATGCAGCGCAGAACCAACCCGCAACGTGGCTTCACTCTGCTTGAACTCCTGGTGGTCCTGGTGGTACTCGGCCTGCTGGC
CGGCATCGTCGCACCCAAGTACTTCAGTCAGCTCGGCCGCTCCGAGGCCAAGGTAGCGCGGGCGCAGATCGAGGGGCTGA
GCAAGGCCCTGGACTTGTATCGCCTGGAGGTCGGCCACTACCCCAACAGCGAACAAGGCTTGCAGGCGCTGGTGGTCGCG
CCCAGTGGCGAGGCTCGCTGGACCGGCCCGTACCTGCAGAAGGCCGTGCCGCAAGATCCGTGGGGCCGCCCTTATATCTA
CCGGCAACCCGGTGAGAACGGCGGTGAGTACGACCTGCTGTCGATGGGCAAGGACGGCCAGCCGGGCGGCGATGGCGAAA
ACGCCGAAATCACCAGTTGGCAGTAA

Protein sequence :
MQRRTNPQRGFTLLELLVVLVVLGLLAGIVAPKYFSQLGRSEAKVARAQIEGLSKALDLYRLEVGHYPNSEQGLQALVVA
PSGEARWTGPYLQKAVPQDPWGRPYIYRQPGENGGEYDLLSMGKDGQPGGDGENAEITSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-19 43
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xcpT YP_005930202.1 XcpT VFG1871 Protein 1e-18 44
xcpT YP_005930202.1 XcpT VFG0180 Protein 4e-19 44
xcpT YP_005930202.1 XcpT VFG2050 Protein 9e-20 43