Gene Information

Name : PPUBIRD1_2206 (PPUBIRD1_2206)
Accession : YP_005930047.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2503796 - 2504296 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTCAAGTGACTCTCAAAGGCAACCCGGTCCAGGTCAACGGCAACCTGCCACAGGCCGGCGCCCAGGCTCCGGCTTT
CTCCCTGGTAGGTGAAGGCCTGGCTGACAAGTCGCTGAAAGACTACGCCGGCAAGCGCAAGGTGCTGAATATCTTCCCAA
GCGTCGATACCCCGACCTGCGCCACTTCGGTGCGCAAGTTCAACGCCAAGGCCAGCGACGTTGCCAACACCGTGGTGCTG
TGCATCTCGGCTGACCTGCCGTTCGCCCAGGCTCGTTTCTGCGGCGCCGAAGGGCTGGAGAATGTGAAGAACCTGTCGAC
CCTGCGTGGCCGCGAGTTCCTCGAAAACTACGGCGTAGCCATCGCCGACGGCCCGCTGGCCGGCCTGGCCGCCCGCGCCG
TGGTGGTGCTGGACGAGAACGACAAGGTGCTGCACAGCGAACTGGTTGGCGAAATTGCTGACGAGCCGAACTACGACGCG
GCGCTGGCTGTACTGAAGTAA

Protein sequence : 
MAQVTLKGNPVQVNGNLPQAGAQAPAFSLVGEGLADKSLKDYAGKRKVLNIFPSVDTPTCATSVRKFNAKASDVANTVVL
CISADLPFAQARFCGAEGLENVKNLSTLRGREFLENYGVAIADGPLAGLAARAVVVLDENDKVLHSELVGEIADEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 8e-30 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-30 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 8e-30 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 6e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPUBIRD1_2206 YP_005930047.1 redoxin domain-containing protein VFG0087 Protein 2e-30 48