Gene Information

Name : glcE (PPUBIRD1_2016)
Accession : YP_005929869.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Unknown
Product : GlcE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2269866 - 2270918 bp
Length : 1053 bp
Strand : -
Note : glycolate oxidase FAD binding subunit

DNA sequence :
ATGAGCATGGACCGCGACATGAGCCAGACGCTGTTGGAGCAGGTCAACCAGGCGCTGAACGAAGGTACGCCGCTGCGTAT
CCAGGGCAGCAACAGCAAAGCGATGTTGGGTAACCCGGTGGCTGGCGAAGTCCTCGACACCCGCAACCACCGCGGCATCG
TCAGCTACGACCCCACCGAGCTGGTACTCACGGCCCGCGCTGGTACTCCCCTGCGCGAGATCGAGGCAGCCCTGCACGAG
GCCGGCCAGATGCTGCCCTGCGAACCACCCCACCTGGGCCCCGAGGCCACCTTGGGCGGCATGGTCGCGGCCGGGTTGTC
TGGCCCGCGACGGCCGTGGGCCGGGTCGGTGCGCGACTTTGTACTGGGTACACGGGTGATCACCGGCCACGGCAAGCTGC
TGCGCTTTGGTGGCGAGGTGATGAAGAACGTCGCCGGCTACGATGTGTCACGCCTGATGGCGGGCAGCTTCGGATGCCTG
GGGCTGCTGACGGAGGTTTCGCTGAAAGTGCTGCCACGGCCGCGCCTGTGCCTGAGCCTGCGCCTGGCGATGGGCCGCAA
TGAAGCGCTGGTCGAGCTGGCCGAATGGGGCCAGCAACCACTGCCGATCAGCGCCGCCTGCCATGACGGCGAAACGCTGT
ACCTGCGCCTGGAAGGCGGCGAAGGGTCAGTGCAGTCGGCACGCCAGCGGCTGGGGGGCGAAACGCTCGATAACCGCTTC
TGGACCGACCTGCGCGAACAGCGCCTGACGTTCTTTGCCGACGACGCCCCTCTGTGGCGCCTGTCCGTACCCACCGTTAC
CGGCGAGCTGGACCTACCCGGCCAGCAACTGATCGACTGGGGGGGTGCTCAGCGTTGGCTCAAGACCTGTGCACCGGCGC
AGGCCATTCGCGACCAGGTCGCCAAGGTGGGCGGCCACGCCACCTGCTACGCCCCCGGTGCAGCCAGCAGCCCGCCGCTG
CCGGTTGCACTGATGCGCTATCACCGCGCCCTCAAGCAGCAGCTCGATCCCCAGGGGGTGTTCAACCCTGGTCGCCTGTA
CCCGGACCTGTGA

Protein sequence :
MSMDRDMSQTLLEQVNQALNEGTPLRIQGSNSKAMLGNPVAGEVLDTRNHRGIVSYDPTELVLTARAGTPLREIEAALHE
AGQMLPCEPPHLGPEATLGGMVAAGLSGPRRPWAGSVRDFVLGTRVITGHGKLLRFGGEVMKNVAGYDVSRLMAGSFGCL
GLLTEVSLKVLPRPRLCLSLRLAMGRNEALVELAEWGQQPLPISAACHDGETLYLRLEGGEGSVQSARQRLGGETLDNRF
WTDLREQRLTFFADDAPLWRLSVPTVTGELDLPGQQLIDWGGAQRWLKTCAPAQAIRDQVAKVGGHATCYAPGAASSPPL
PVALMRYHRALKQQLDPQGVFNPGRLYPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 2e-103 66