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Name : PPUBIRD1_1699 (PPUBIRD1_1699) Accession : YP_005929571.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1928895 - 1930502 bp Length : 1608 bp Strand : - Note : - DNA sequence : ATGAGTGAACAGAACCTGATCGAAGTGCGGGACCTGGCCGTGGAGTTCGTGACCGGGGACCAGGTCAACCGGGTGGTGGA CGGCGTCAGCTTCGATATTCGCAAAGGCGAGACACTGGCCCTGGTGGGCGAAAGTGGCTCGGGCAAATCGGTCACCGCGC ACTCGATCCTGCGCCTGCTGCCCTATCCCCTGGCCCGGCACCCCAGCGGCAGCATCCGCTACGAAGGCAAGGACCTGCTG CAGCAGAACGAGAAGACCCTGCAGCGCATTCGCGGTAACCGCATTGCGATGATCTTCCAGGAGCCGATGACCTCACTCAA CCCGCTGCATTGCATCGAGAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACCGGCAAGGAAGCGACTGCGC GCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGC GGGCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGC GCTGGATGTGACCGTGCAGCTGAAGATACTCGAGCTGCTCAAGGAATTGCAGGCACGTATGGGCATGGCCCTGTTGCTGA TCAGCCATGACCTGAACTTGGTACGCCGCATCGCTCACCGCGTGTGCGTGATGCAGCGTGGGCAAATTGTCGAGCAAGCC GAATGCGCCACGCTGTTCAGTTCGCCACAGCACCATTACACCCAGATGCTGATCAATGCCGAACCCAGCGGGCTGCCGGC GCACAATCCGGTGGGCGCGCCGTTGCTGGAGGTGGATGACCTCAAGGTCTGGTTCCCGATCAAGAAGGGCTTTCTGCAAC GCACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCCCAGGGCCAGACGCTGGGCATTGTTGGCGAA TCCGGGTCGGGCAAGTCCACATTGGGCCTGGCTATCTTGCGGCTGATTTCCAGCCAGGGCGGCATTCGCTTTCATGGGCA GAACCTCGAAGGGCTGAACCAGAAAGCCGTGCGACCCTTGCGGCGGGAAATGCAGGTGGTGTTCCAGGACCCGTTTGGCA GCCTGAGCCCGCGCATGTGCGTAGCGGATATCGTCGGCGAAGGGTTGCGCATTCACGGTATTGGCAATGCGCAGGAACAG GAAGCGGCGATCATCGCGGCGCTGGAGGAAGTGGGGCTGGACCCGCGCACGCGGCATCGCTACCCGCATGAGTTTTCGGG TGGCCAGCGCCAGCGCATAGCGATTGCCCGGGCGCTGGTGCTGAAGCCGGCGCTGATTCTGCTGGATGAGCCCACCTCGG CGCTGGACCGTACCGTACAGCGGCAAGTGGTCGAGCTGCTGCGTAATCTGCAGCAGAAGTACAACCTGACCTACTTGTTC ATCAGCCATGACCTGGCAGTGGTCAAGGCGTTGAGCCACCAATTGATGGTGATCAAGCATGGGCATGTGGTAGAGCAAGG GGACGCGCAGGCAATCTTCCATGCGCCGCAGCATCCCTATACGCGGCAGTTGCTGGAGGCGGCGTTTTTGGAGGTTGAGG ATTTGTAG Protein sequence : MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLL QQNEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA ECATLFSSPQHHYTQMLINAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGE SGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHGIGNAQEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLF ISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAAFLEVEDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-75 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-75 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-75 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-75 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-94 | 42 |
