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Name : cox1 (PPUBIRD1_0132) Accession : YP_005928046.1 Strain : Pseudomonas putida BIRD-1 Genome accession: NC_017530 Putative virulence/resistance : Unknown Product : Cox1 Function : - COG functional category : - COG ID : - EC number : 1.9.3.1 Position : 138648 - 140237 bp Length : 1590 bp Strand : + Note : cytochrome c oxidase, subunit I DNA sequence : ATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCT GACCACCAACCATAAAGACATCGGCACGATGTACTTGTGGTTCAGTTTCATCATGTTCCTGCTGGGTGGCTCGTTCGCCA TGGTGATCCGCGCCGAGCTGTTCCAGCCTGGCTTGCAGATCGTGGAGCCGGAATTCTTCAACCAGATGACTACCATGCAT GGCCTGATCATGGTGTTCGGCGCGGTGATGCCGGCCTTCGTCGGCCTGGCCAACTGGATGATTCCGCTGATGGTCGGCGC GCCCGACATGGCACTGCCACGGATGAACAACTTCAGCTTCTGGCTGCTGCCGGCGGCCTTCCTGCTGCTGGTATCGACGC TGTTCAGCCCGGGCGGAGGGCCAAACTTTGGCTGGACCTTCTACGCACCGCTTTCCACCACCTATGCGCCAGCCAGCGTC ACCTTCTTCATCTTCGCCATCCACCTGATGGGTATCAGCTCGATCATGGGGGCGATCAACGTGATTGCCACCATCCTCAA CCTGCGTGCCCCCGGCATGACGCTGATGAAAATGCCGCTGTTCGTCTGGACCTGGCTGATTACCGCGTTCCTGCTGATTG CGGTGATGCCAGTACTGGCCGGCGTGGTAACCATGATGCTGATGGATATCCACTTCGGTACCAGCTTTTTCAGTGCCGCA GGTGGCGGTGACCCGGTGCTGTTCCAGCATGTGTTCTGGTTCTTCGGTCACCCTGAGGTGTACATCATGATCCTGCCCGC CTTCGGTGCGGTCAGCTCGATCATCCCGGCGTTCTCGCGCAAGCCGCTGTTCGGTTATACCTCGATGGTGTATGCCACCG GCGCCATTGCCTTCCTGTCATTCATCGTCTGGGCCCACCATATGTTCGTGGTCGGCATCCCGGTGGTAGGCGAGTTGTTC TTCATGTATGCCACCATGCTGATTGCCGTGCCCACCGGGGTGAAGGTATTCAACTGGGTCAGCACCATGTGGGAAGGTTC GCTCACCTTCGAAACGCCGATGCTGTTCGCCATCGCCTTTGTCATCCTGTTCACCATCGGTGGTTTCTCCGGGTTGATGC TGGCGATCGCCCCGGCAGACTTCCAGTACCACGACACTTACTTCGTGGTGGCGCATTTCCATTACGTACTGGTGCCTGGT GCAATTTTCGGCATCTTTGCCTCGGCCTACTACTGGCTGCCGAAATGGACCGGCCACATGTACGACGAAACCCTCGGCAA ACTGCACTTCTGGCTGTCGTTCGTCGGCATGAACATGGCCTTCTTCCCCATGCACTTCGTAGGCTTGGCCGGCATGCCAC GGCGCATCCCCGACTACAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACG CAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGA GGGCCTTGAGTGGTCGATACCTTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAG Protein sequence : MSAVIDDHAHGHDHAHGPAKGLMRWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQIVEPEFFNQMTTMH GLIMVFGAVMPAFVGLANWMIPLMVGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGPNFGWTFYAPLSTTYAPASV TFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAA GGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGELF FMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPG AIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFMFGAT QIFFLFIVIKCIRGGAPAPAKPWDGAEGLEWSIPSPAPYHTFQTPPEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 4e-99 | 48 |
