Gene Information

Name : PPUBIRD1_1099 (PPUBIRD1_1099)
Accession : YP_005928986.1
Strain : Pseudomonas putida BIRD-1
Genome accession: NC_017530
Putative virulence/resistance : Virulence
Product : General secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1241725 - 1242159 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGCATCGACGTAACCGCCAACGCGGCTTCACCCTCATGGAAATCATGGTGGTGATCTTCATCATCGGCCTGCTGAT
TGCCGTGGTGGCGCCCAGCGTGCTGGGCAACCAGGACAAGGCCATGAAGCAGAAGGTGATGGCCGACCTGGCCACCCTGG
AGCAGGCGCTGGACATGTACCGGCTGGACAACCTGCGCTTCCCCAGCAGCGAACAGGGCCTGGCCGCGCTGGTGAAAAAG
CCGGCTCAGGAGCCAGTGCCTCGGGCCTGGCGCAGTGATGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCC
GTACCAGTACCGCATGCCCGGGGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCTGCCGGGCGGCGAAG
GCCAGGATGCCGACCTGGGTAACTGGGCGCTGTAA

Protein sequence : 
MQHRRNRQRGFTLMEIMVVIFIIGLLIAVVAPSVLGNQDKAMKQKVMADLATLEQALDMYRLDNLRFPSSEQGLAALVKK
PAQEPVPRAWRSDGYVRRLPEDPWGTPYQYRMPGEHGRVDVYSLGADGLPGGEGQDADLGNWAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-37 55
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-38 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPUBIRD1_1099 YP_005928986.1 General secretion pathway protein G VFG2050 Protein 3e-38 55
PPUBIRD1_1099 YP_005928986.1 General secretion pathway protein G VFG0180 Protein 2e-36 54
PPUBIRD1_1099 YP_005928986.1 General secretion pathway protein G VFG1871 Protein 6e-34 50