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Name : gabD (lmo4a_0929) Accession : YP_005925922.1 Strain : Listeria monocytogenes L99 Genome accession: NC_017529 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 946977 - 948443 bp Length : 1467 bp Strand : + Note : NAD-dependent aldehyde dehydrogenases DNA sequence : TTGAGTATTAAAGAAACAGCCTTACCAAAAGTTCAAACAAAATTATTTATTAATGGAAAATGGACGGATGGAGATAATAA AGAAACAAAAGATATTGTAAACCCAGCAAACGGAGAAGTTATTGCCAAAATCGCTCAAGCTGGACCAAACGAAACCAAAA AAGCCATTAAAGCTGCAAAAGAAGCATTTCCTGATTGGGCAAAAATGGAACTAGCTGATCGCGTCAAATTATTACACAAA ATTGCCGATTTAATGGAAGAAAAAGCAGATACACTAGCAAAAATTATGACGCTTGAACAAGGTAAACCGCTAAAAGAATC AAAAGGAGAAGTCCTAACTGGCGCAGAAAACTTCCGATTCGCTGCAGAAGAAGCAAGAAGATTATATGGGGAAACTATCC CAGCGCCAAACAATCATGCGTTTATCGTGAAAAAACAACCAATTGGCGTAGTTGCGGCCATTACTCCGTGGAATTTCCCA GGTGGTATGGTGACACGAAAACTTGCTCCAGCGCTTGCAACCGGAAATACAATCGTATTAAAACCATCCGGAGATACGCC GCTTTCAGCCCTAGCTATCTTTGAAATTTTTGAAGAAGCCGGCTTGCCAAAAGGTGTTGCCAATATCGTTATGGGTAGCT CCAAAGAAATCGGCGAAACGTTAACTGACAGTGATGATGTTCGTAAACTAACTTTCACCGGCTCCACGAAAGTCGGTCAA ACACTATTCAAACAATCAGCCGAAACACTGAAAAAAATCTCGCTCGAACTTGGTGGACATGCGCCATTTATCGTATTTGA TGATGCGAACCTGGATGCTGCTGTAAATGATTTAGTTGCAGCGAAATTCCGCAATAACGGTCAAGTATGTGTATCGCCAA ACCGAATTTTTGTTGCCAAAGAAATTAAAGAAAAATTCACTAAGGCGCTAGTTGCTAAAGTAAAACAACTAAAAGTAGGT AACGGTTTAGATGATGTGAATGTTGGTCCACTTATCCGCGAAGATGCGATTGACAAAATCGACAAACAACTTAAAAATGC CACAGATAAAGGTGCCAAAGTCTTAACTGGTGGCGGCCGTTTAACAGGTTCCGACTATGACAAAGGGAACTTCTACAAAC CAACTGTCTTAGATAATGTTACCCGTGAAATGGATATTTTCTACGAAGAAACATTTGGTCCAGTAATCCCACTCATCACA TTTGAAACGGAAGACGAAGCAATCGAAATGGCGAATGACAGTGAATTCGGTCTTGCTTCTTACTTCTATACAAAAGACTT AGCTCGCGTAGAAAAAGTAGGTGCGGCATTAGAATATGGTATGGTAGGTGCAAACGAAATTGCGATTTCTAACCCAGAAA CCCCATTTGGCGGTGTTAAACATTCTGGTTTCGGTCGCGAAAACGGCCACTACGGTATGGAAGAATACATCCAAGTGAAA TTTATTAATTTAAAATATCGTGACTAA Protein sequence : MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGEVIAKIAQAGPNETKKAIKAAKEAFPDWAKMELADRVKLLHK IADLMEEKADTLAKIMTLEQGKPLKESKGEVLTGAENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIGETLTDSDDVRKLTFTGSTKVGQ TLFKQSAETLKKISLELGGHAPFIVFDDANLDAAVNDLVAAKFRNNGQVCVSPNRIFVAKEIKEKFTKALVAKVKQLKVG NGLDDVNVGPLIREDAIDKIDKQLKNATDKGAKVLTGGGRLTGSDYDKGNFYKPTVLDNVTREMDIFYEETFGPVIPLIT FETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIAISNPETPFGGVKHSGFGRENGHYGMEEYIQVK FINLKYRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-96 | 52 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-72 | 41 |
