Gene Information

Name : lmo4a_0084 (lmo4a_0084)
Accession : YP_005925075.1
Strain : Listeria monocytogenes L99
Genome accession: NC_017529
Putative virulence/resistance : Unknown
Product : SNF2/RAD54 helicase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 86876 - 88267 bp
Length : 1392 bp
Strand : +
Note : 'Superfamily II DNA/RNA helicases, SNF2 family'

DNA sequence :
ATGAATGAGACAATACAATTCGTAGCACATGACTATCAGGAGTACGCAATTAATAAAATAACAGCATCCCCTAAATGTGG
GCTATTTTTAGACATGGGGATGGGAAAAACAGTGACAACTTTAACCGCCATAGCAGGACTGATGTATAACCTGTTAGAGG
TTAACAAAGTGCTAGTTATAGCACCACTTCGTGTAGCAGAAGATACATGGAGTCGTGAAACGGAAAAATGGAGTCACACA
GCTTTCTTACAAGTTTCTAAAATTTTAGGGCCTGCTGAATGTCGCAAGGAGGCTTTAAATCAAAGAGCGGATATTTATGT
TATCAATCGTGAGAACCTTGCTTGGTTAGTAGACCATCTAGGGAAAAACTGGGATTTTGATATGGTCGTAGTTGATGAGT
TTTCAAGTTTCAAAAACAGCAAATCACAGAGATTTAAAGCATTGAGAAAAGTACTGCCGAAAATCAAACGACTCGTAGGC
TTGACTGGTACTCCAGCGCCAAATACGTTGCTAGATTTATGGCCTCAAATATATCTGCTAGACCGCGGAGAACGTTTAGG
TAAAACTAAGCGAGCATATCTAGATAAGTACTTCACACCTGGCGCAAGAAACGGGCATGTTATATTTGAGTGGCGGCTAA
AGAATGGAGCAGAGGACCGTATACACCAACACATTAGCGATATATGTGTAAGTATGAAAGCCGAAGATTGGCTGGAAATG
CCAGAGAGAATTGATAACACAATATCTATTAAACTGCCTAGTAAAGCGAGAGCGCAGTATTCAGAGCTGGAGAAGGAGTT
CCTGCTAGAGTTCGAGCATTCTGACGTGGTTGCAGACTCGGCAGCGGTACTCTCTAATAAACTCCTGCAGTTAGCCAACG
GTGCCATCTATGATGAAAACCAGGAGTATCAAGAAATACACAATAAGAAACTAGAAGCTTTAGCAGACATTATAGAGGAG
AGTGTAGGGCAACCGGTTCTGGTTTTCTACAGCTATAAACATGACGAGAAGCGAATACTAAATCACTTAAAGCAATATAA
ACCAGAGAAAATAAAAGACTCAAGAAGCATCAGAAAATGGAATGCAGGTAAGACCAGGGTGCTACTAGCACACCCAGCGA
GTGCAGGGCACGGACTGAATCTCCAGGATGGTGGACATATCGTTGTATGGTTTGGGCTCACGTGGAGCTTAGAGCTATAT
CAACAAGCTAACGCGAGGCTATTCAGACAGGGGCAGAAAAAATCTGTGATAGTACATCACATAGTTGCAAAGGATACCTT
AGACGAGAAGGTTATCGAGGCATTGAGCAGTAAGAAAGTTGGGCAAGACGCATTACTTGAGGCGGTTAAAGCAAGACTGG
AGAAGGTTAAAAGAGATGAAAGGTGGAGATAG

Protein sequence :
MNETIQFVAHDYQEYAINKITASPKCGLFLDMGMGKTVTTLTAIAGLMYNLLEVNKVLVIAPLRVAEDTWSRETEKWSHT
AFLQVSKILGPAECRKEALNQRADIYVINRENLAWLVDHLGKNWDFDMVVVDEFSSFKNSKSQRFKALRKVLPKIKRLVG
LTGTPAPNTLLDLWPQIYLLDRGERLGKTKRAYLDKYFTPGARNGHVIFEWRLKNGAEDRIHQHISDICVSMKAEDWLEM
PERIDNTISIKLPSKARAQYSELEKEFLLEFEHSDVVADSAAVLSNKLLQLANGAIYDENQEYQEIHNKKLEALADIIEE
SVGQPVLVFYSYKHDEKRILNHLKQYKPEKIKDSRSIRKWNAGKTRVLLAHPASAGHGLNLQDGGHIVVWFGLTWSLELY
QQANARLFRQGQKKSVIVHHIVAKDTLDEKVIEALSSKKVGQDALLEAVKARLEKVKRDERWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 1e-109 57
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 8e-115 54
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 2e-121 54
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 1e-124 54
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 9e-125 54