|
Name : lmo4a_0082 (lmo4a_0082) Accession : YP_005925073.1 Strain : Listeria monocytogenes L99 Genome accession: NC_017529 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 83854 - 86292 bp Length : 2439 bp Strand : + Note : - DNA sequence : TTGAATGCGAAAGATATTGCTATCTCCGCAGATGGCAAACTGACTCTAGCAGTCGGAAAAAGCCGGAAAGAAAAGGCCTG GAAGAACAAAGAAACTTCATGGCAAAAAGTACTGGAGAAAATAAGTCAGACGACAAGAACGAAAGAAACTATCGACGAAT ACTTGCAGATGTCGAAAGCAGAGCAATCTGTGATAAAAGATGTTGGTGGGTTCGTAGGTGGTACATTGCTAAAAGGTCGT CGAAAAGCCGAAAACGTAAAATGGCGTCAATTGATAACGCTAGATGCCGATTTTGCAGCTCCGGGGCTCTGGGAAGAGAT AGAGCTGTTTTACAACTTTGCTTGTGCTGTTTACTCAACGCATAAGCATACTGATGCAAAGCCGCGATTGCGGGTAGTTA TCCCGCTGACGAGAGCAGTTACACCAGATGAATACCAAGCGGTTAGTAGAAGGATTGCAGCTGATTTGGATATCGATGTA TTTGACGATACGACTTATCAGCCTCATCGTTTAATGTACTGGCCAAGCACCGCGAAAGATGGCACATTTGAGTTCCACTA CCAGGATGGCGCTTGGCTTGACCCGGATAAGGTGCTGGACCGGTACGATGATTGGACAGACCCGTCATTTTGGCCAGAGT CATCTAGACGTGAAAATGCACGCAAAAAACTGGCTGATAGGCAAGGTAATCCGTTAGAGAAACCTGGTATCGTTGGAGCA TTTTGTAAAACTTACATGATTCAAGATGCTATTGAGGCGTTTTTGCCAGATAGATATGAGCCTACCGGGGATGGGCGTTA CACATACGCCGATGGAAGCACGGCAGGTGGATTGGTGCTATATGAAAATGGGCTATTTGCTTATAGCCATCATGGCACCG ACCCTATTTCCGAAAAACTGGTAAATGCTTTTGATTTAGTGCGTATCCACAAATTTGGCGCACAGGATGATGACGCGCAA GAAGGAACTCCGGTTAATCGCTTGCCTTCATTTATGGCCATGGCCGATTTTGCAAGAAATGATGACAGTGTCAAAGAGCA TCTAGTTGAGTCCTCGCTTACAAGTGCATTAGAAGATTTTGCAGACATGCTGGACGAAGTGGATGAGGAAAGCGAAGAAG TAGATAAGAGCTGGATGAAGAAACTAACCCTCAATCGAAATGGCAAAGTGGAGTCCACAGCTCCGAATATCTTACGAATT TTAGAGAATGACCCAAACCTGCGAGGGAAGTTTGGCTACAACGAATTTAACTACCGAATGTCCATTCTTGGTAATGTGCC TTGGAGAAAAACCACGAAGAAGGTAGATGAAAAGAACGACTTGGACGATAGCGCCTTGCGTAATTACCTAGAGTCCGTTT ATCAGATTAGTGGTAAGGATAAAATCAAAGATGCGCTCAGGGAGGTTATGCATCGTCAACGTTTTCACCCAGTTCGGAAG TATTTGAGTGGACTGGAGTGGGATGGAAAAGAGCGGCTGGATACACTTTTGGTTGATTACCTTGGTGCAGCGGACTCGGA ATATACGAGAATTGTGACTCGCAAGACGTTTGCAGCCGCTGTGGCCAGGGTGCTTGTGCCCGGAATCAAATTTGATCAAG TCCTTACGTTAACTGGGACGCAAGGCATTGGTAAAAGCACACTGCTAGATAAACTGGGTAAGGAGTGGTATTCAGATAGT TTAGAGGACTTACACGGTAAATCAGCCTACGAGTTGCTGCAAGGCTACTGGATTATGGAACTAGGTGAGCTATCCGCATT GAATAAAACAGAAGTAGAGAAAGCTAAAGCATTTATATCAGCAAGAGAAGACCGCTTCCGCGTAGCGTATGGTGAGAATG TGCAGGGCTTTCCCAGACAATGCATTTTCATAGCAACAACAAACGATAACACCTTTCTGCGAGATGGAACAGGTAATCGG CGTTTCTGGCCTGTAGAAGTTCATGGGTTTGGTGAAAAGTCAGTATTTACGGACTTGAAAGAAGATGAGGTGGACCAAAT TTGGGCGGAGGCTTTTGTCCGTTATAAAGAAGGGGAAGCGTTGTATCTGCAAGGTGAAATGGAGAATCAAGCAAGAATGC AACAAGCTAAGTTTACAGAGTCTAATGTCTTAGAGGGGCTCATCCGTGAGTATCTCGAAACTCCTGTGCCTGCCGACTGG AGTAGTTGGAATGCGCCAGCAAGAAGGGCGTTTTTAAGGGGAGAGGACTTCGAGGAGGTCGAGCGGGATGACTTAGTGCT GCGAGACAAGATTTGCGCCATGGAAATTTGGTGCGAGTTAATGGATGGCGACGCAAAACAGTTAACGAAGCAGAAAGCGC GTGAGATAAATGATGCACTTCGTAACATAGAAAACTGGAAAGATAATCAAGGAGTTTTACGCTTCGGTAAATTGTACGGA AGGCAGCGAGCCTACACTAGGATTACTTTAGCGAAGTAA Protein sequence : MNAKDIAISADGKLTLAVGKSRKEKAWKNKETSWQKVLEKISQTTRTKETIDEYLQMSKAEQSVIKDVGGFVGGTLLKGR RKAENVKWRQLITLDADFAAPGLWEEIELFYNFACAVYSTHKHTDAKPRLRVVIPLTRAVTPDEYQAVSRRIAADLDIDV FDDTTYQPHRLMYWPSTAKDGTFEFHYQDGAWLDPDKVLDRYDDWTDPSFWPESSRRENARKKLADRQGNPLEKPGIVGA FCKTYMIQDAIEAFLPDRYEPTGDGRYTYADGSTAGGLVLYENGLFAYSHHGTDPISEKLVNAFDLVRIHKFGAQDDDAQ EGTPVNRLPSFMAMADFARNDDSVKEHLVESSLTSALEDFADMLDEVDEESEEVDKSWMKKLTLNRNGKVESTAPNILRI LENDPNLRGKFGYNEFNYRMSILGNVPWRKTTKKVDEKNDLDDSALRNYLESVYQISGKDKIKDALREVMHRQRFHPVRK YLSGLEWDGKERLDTLLVDYLGAADSEYTRIVTRKTFAAAVARVLVPGIKFDQVLTLTGTQGIGKSTLLDKLGKEWYSDS LEDLHGKSAYELLQGYWIMELGELSALNKTEVEKAKAFISAREDRFRVAYGENVQGFPRQCIFIATTNDNTFLRDGTGNR RFWPVEVHGFGEKSVFTDLKEDEVDQIWAEAFVRYKEGEALYLQGEMENQARMQQAKFTESNVLEGLIREYLETPVPADW SSWNAPARRAFLRGEDFEEVERDDLVLRDKICAMEIWCELMDGDAKQLTKQKAREINDALRNIENWKDNQGVLRFGKLYG RQRAYTRITLAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAUSA300_1410 | YP_494107.1 | virulence-associated protein E | Virulence | ¥ÕSa2 | Protein | 0.0 | 50 |
| SAOV_0312 | YP_005735829.1 | virulence-associated protein E | Virulence | ¥ÕSa1 | Protein | 0.0 | 50 |
| MW1408 | NP_646225.1 | hypothetical protein | Not tested | ¥ÕSa2 | Protein | 0.0 | 50 |
| SH1781 | YP_253696.1 | hypothetical protein | Not tested | ¥ÕSh1 | Protein | 0.0 | 50 |
