Gene Information

Name : lmo4a_2583 (lmo4a_2583)
Accession : YP_005927576.1
Strain : Listeria monocytogenes L99
Genome accession: NC_017529
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2644660 - 2645331 bp
Length : 672 bp
Strand : -
Note : 'ABC-type sugar transport systems, ATPase components'

DNA sequence : 
ATGACTTTAATAATGAAAAATATTTCTAAAAATTATCAAGATGGCGAGCAAGTCATCGAAGTATTGAAAAATGTTTCTTT
AGAAGTAGCACAAGGAGAATTCGTTGCAATCGTCGGACCTTCTGGCGCTGGGAAAAGTACATTTTTATCAATCGCAGGCG
CTTTATTATCTCCAACAGAAGGCGAAATTGCCATTGGTGGAACGACATTAAATAACATGTCTGAAAAAGCATTAACGAAG
GTGCGACTCGACAAAGTTGGCTTTATTTTCCAAGGTGCCAACTTAATTCCTTACCTAAGTGTTCGTGACCAACTACTCGT
CATTGCGGAATTATCCGGTGAAAAAGGTAGCGCTGCGAAAGAAAGAGCAGATAAATTGCTTCAAGAATTAGGCTTAACCG
CGCGCCAAAACAATTATCCGGAGAGTTTGTCAGGTGGCGAAAAACAACGCGTTGCCATTGCTAGAGCACTCATGAATGAT
CCAGATATTATTCTAGCCGATGAACCCACAGCTAGTTTAGATGCCAACCGCGGACATAAAGTAGTTCAAATGATTGCAGA
TGAAGTAAAACGGAAAAATAAAGCTGCCATCATGGTTACACATGACGAACGAGTGTTAGATTTAGTCGACCGTGTGATTC
GAATTGAAGATGGCTATTTAAAAGCAGAATAA

Protein sequence : 
MTLIMKNISKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGTTLNNMSEKALTK
VRLDKVGFIFQGANLIPYLSVRDQLLVIAELSGEKGSAAKERADKLLQELGLTARQNNYPESLSGGEKQRVAIARALMND
PDIILADEPTASLDANRGHKVVQMIADEVKRKNKAAIMVTHDERVLDLVDRVIRIEDGYLKAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 6e-44 47
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 5e-50 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lmo4a_2583 YP_005927576.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-40 44
lmo4a_2583 YP_005927576.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-37 42
lmo4a_2583 YP_005927576.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-36 42
lmo4a_2583 YP_005927576.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-33 41