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Name : clpC (lmo4a_0248) Accession : YP_005925239.1 Strain : Listeria monocytogenes L99 Genome accession: NC_017529 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 269885 - 272347 bp Length : 2463 bp Strand : + Note : 'ATPases with chaperone activity, ATP-binding subunit' DNA sequence : ATGATGTTTGGACGATTTACGCAAAGAGCTCAGAAAGTACTCGCGTTGTCACAAGAAGAGGCGATGCGTTTGAATCATAG TAATTTAGGAACAGAACATATTTTATTAGGGCTTGTAAGAGAAGGCGAAGGAATTGCGGCGAAAGCTCTCTATGAACTGG GAATTAGTTCTGAAAAAGTGCAGCAAGAGGTAGAAGGATTAATTGGTCATGGGGAAAAAGCTGTGACGACGATCCAATAT ACACCTCGTGCGAAAAAAGTAATTGAACTTTCCATGGATGAGGCTCGTAAATTAGGGCATACTTACGTTGGGACAGAACA TATCTTACTTGGGCTTATTCGTGAAGGCGAAGGAGTTGCGGCGCGTGTTTTAAGTAATCTTGGTATTAGTTTGAATAAAG CTCGTCAGCAAGTTTTACAGCTCTTAGGCGGCGGTGATGCTACTGGGGCAGGGAGACAAACAAATACGCAAGCTACACCG ACTTTAGATAGTTTGGCACGTGATTTAACAGTTATTGCTCGGGAAGATAATTTGGATCCGGTTATTGGCCGTTCTAAAGA AATCCAACGTGTGATTGAAGTACTTAGTCGCCGGACGAAAAATAACCCGGTACTCATCGGGGAACCGGGTGTTGGTAAAA CAGCGATTGCAGAAGGCTTAGCGCAACAAATTGTTCGTAATGAAGTGCCTGAGACCTTACGTGGAAAACGTGTAATGACA CTGGATATGGGGACTGTTGTAGCAGGTACAAAATATCGTGGGGAATTCGAAGACCGTTTGAAGAAAGTAATGGATGAAAT TCGTCAAGCTGGTAATGTTATTCTATTTATTGATGAATTGCATACGTTAATCGGTGCTGGTGGGGCAGAAGGTGCGATTG ATGCTTCGAATATCTTGAAGCCACCTCTAGCTCGTGGAGAATTGCAATGTATTGGGGCAACAACGCTGGATGAGTACCGT AAATACATCGAAAAAGATGCGGCGCTTGAGAGACGTTTCCAACCAATCAAAGTAGATGAACCAACTGTAGAAGAATCTAT TCAAATTTTACATGGATTGCGTGATCGTTATGAAGCGCATCACCGTGTTGCAATTACGGATGAAGCTCTTGAGGCTGCTG TTCGTCTATCTGATCGTTACATTTCTGACCGTTTCTTACCCGATAAAGCGATTGATGTAATTGATGAATCTGGGTCTAAA GTACGTTTAAAATCTTTTACAACGCCAAAAAATGTAAAAGAAATGGAAAACAATTTATCTGAATTGAAAAAAGAAAAAGA TGCGGCTGTTCAAGGACAAGAATTTGAAAAAGCAGCGTCATTACGCGATAAAGAACAAAAACTTAAAAAATCATTAGAAG AAACAAAAGCGAATTGGCAAGAAAAGCAAGGGCTTGACCATAGTGAAGTAACAGAAGATATTGTTGCTGAAGTTGTTGCT AGTTGGACTGGGATTCCAGTTGCAAAACTTGCGGAGACAGAGACAAATAAACTTTTAAATATGGAGAAACTTTTACATGA ACGTGTGATTGGGCAAGATGCTGCGGTGAAAGCTGTTTCGCTAGCTGTACGTCGAGCTCGTGCGGGGCTTAAAGATCCTA AGCGTCCAATTGGTTCCTTTATTTTCCTTGGACCTACTGGTGTTGGGAAAACAGAACTTGCTCGCGCGCTTGCTGAGTCT ATGTTTGGCGATGAGGATTCGATGATTCGAATTGACATGTCTGAGTACATGGAGAAATTCTCCACAGCTCGTTTAGTTGG GGCTCCTCCAGGTTATGTAGGCTATGAAGAAGGTGGGCAACTGACAGAAAAAGTTCGTCAAAAACCTTATTCAGTAGTCC TTTTAGATGAAATTGAAAAAGCACATCCGGATGTATTTAATATGTTGCTACAAGTGCTTGACGATGGTCGTTTGACTGAT TCTAAAGGACGAGTGGTTGATTTTAGAAATACGGTTATCATTATGACTTCCAATATTGGGGCTCAAGAAATGAAACAAGA TAAATCAATGGGCTTTAATGTTATTGATCCGCTTAAAGACCATAAGGCTATGGAGCATCGTGTTTTACAAGATTTAAAAC AGGCGTTCCGACCAGAGTTTATCAACCGAATTGATGAAACAATTGTATTCCATTCGCTACAAGAAAAAGAATTGAAACAA ATTGTTACACTGCTCACTGCCCAATTAACGAAACGTCTAGCTGAACGCGATATTCATGTGAAATTGACTGAAGGCGCGAA AGCTAAAATTGCCAAAGACGGTTATGATCCAGAATACGGAGCCCGTCCTTTGAAACGAGCTATTCAAAAAGAAGTAGAAG ATATGCTTTCTGAAGAATTGCTTCGTGGCAACATTAAAGTAGGCGATTACGTAGAAATTGGTGTGAAAGATGGCAAGTTG GAAGTTAGAAAAAAAGATGCACCAAAAAAGAAAACAACCGCCAAAAAGGTAAAAGCTAAATAA Protein sequence : MMFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQY TPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGDATGAGRQTNTQATP TLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMT LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYR KYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFLPDKAIDVIDESGSK VRLKSFTTPKNVKEMENNLSELKKEKDAAVQGQEFEKAASLRDKEQKLKKSLEETKANWQEKQGLDHSEVTEDIVAEVVA SWTGIPVAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES MFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQ IVTLLTAQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDGKL EVRKKDAPKKKTTAKKVKAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-96 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005925239.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 99 |
| clpC | YP_005925239.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 3e-155 | 52 |
