Gene Information

Name : lmo4a_2243 (lmo4a_2243)
Accession : YP_005927236.1
Strain : Listeria monocytogenes L99
Genome accession: NC_017529
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 2290813 - 2291592 bp
Length : 780 bp
Strand : -
Note : 'ABC-type sugar transport systems, ATPase components'

DNA sequence : 
ATGGAAGTAAGGGACGTTAATTTTAGTTATAATGGAACAGATTCTACCTTAAAAAATGTCTCATTTACGATCCAGAAAAA
TAAAATCAATACAATTGTTGGGCCAAATGGTAGTGGTAAATCTACTTTGTTAGAAATTTTGGCTAGACTCCTTTCGCCTG
ATTCTGGTGATGTTTTACTAGAAGGAAAATCGATTTTTGAGTGGAAAGCAAAAGAATTTGCGCAAAATGTAGCGATTGTT
CATCAAAATAATGTGCTTCCGAATGAGTTACCGGTGAAGGAATTGCTCTATTTCGGTAGGCTTCCATATAAGAATTGGCG
AATGACGCGGACAAAGGAGGACGATTTGGCTGTTGAGCGAGCTTTAGTGCAAACAGAGCTAACTGAAAAAGCGGAGAAAT
TTGTCGATAGTCTTTCTGGTGGAGAACGGCAACGTGTTTTTATAGCAACAGCATTGGTTCAGGATACGCCAGTTTTGCTT
TTAGATGAACCAACAACATTTTTGGACATGTATTTTCAACTAGAAATTTTAGAATTGGTGAAACGGTTAAATCAAGAAGA
AAACTTGACGATTGTAATGATTTTGCATGATTTAAACCAAGCGCTGACTTATAGCGACCATCTGATTGTGATGAAGAATG
GGGAAGTTGTTGCAAAAGGAGAACCAGGAGAATTATTAACGACGGAACTAATTGCTGAAACTTATGGTGTGGTTGCGGAG
GTTTTGAGCGATGCGGAAACAGGGAAATACATTGTTCCTCAAAGGCGAAAGGAGTTTTAG

Protein sequence : 
MEVRDVNFSYNGTDSTLKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPDSGDVLLEGKSIFEWKAKEFAQNVAIV
HQNNVLPNELPVKELLYFGRLPYKNWRMTRTKEDDLAVERALVQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPVLL
LDEPTTFLDMYFQLEILELVKRLNQEENLTIVMILHDLNQALTYSDHLIVMKNGEVVAKGEPGELLTTELIAETYGVVAE
VLSDAETGKYIVPQRRKEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-44 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-44 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-44 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-44 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-44 41
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-43 41
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-44 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lmo4a_2243 YP_005927236.1 iron compound ABC transporter ATP-binding protein BAC0164 Protein 6e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lmo4a_2243 YP_005927236.1 iron compound ABC transporter ATP-binding protein VFG0925 Protein 1e-42 43
lmo4a_2243 YP_005927236.1 iron compound ABC transporter ATP-binding protein VFG1042 Protein 5e-43 41