Gene Information

Name : xerD (lmo4a_2012)
Accession : YP_005927005.1
Strain : Listeria monocytogenes L99
Genome accession: NC_017529
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2042745 - 2043638 bp
Length : 894 bp
Strand : -
Note : Site-specific recombinase XerC

DNA sequence :
ATGAATGATTTAATAGAAGATTTTTTACATTTTTTAATTGTAGAGAGAGGTTTATCCGCGAATACAATCAAAGCTTATGA
ACGAGATTTACGCTATTTTGTTTCTTATATGGATGTAGCGAAGGGATTAACAGATCCGAATACACTTGAACGAAGCGATA
TAGTTGGTTTTATGGCATTTGCAAGACAAGAAGGGAAATCACCAAGAAGTGTGGCGCGCTATATTGCTTCACTACGATCT
TTCTTTCATTATTTAATGCACGATGGGAAAATGTCACATGACCCAATGATTCAAATTGAAACGCCGAAGCAAGCGCAAGG
ATTACCAAAAGTTTTAAACCTAGATGATGTGGAGAAATTACTTAGTTCCTCTGATACGAGTACACCACTTGGATTAAGGG
ACCAAGCAATGATGGAAATTTTATATGCGACAGGGCTTCGTGTAACGGAACTTGTCAGCCTGAAAATGGACGATTTACAT
CTTCATATGGGTTTTATTCAAACGATTGGTAAAGGAGATAAAGAAAGAATTATCCCGCTTGGAAAAACGGCAACAACTGT
GTTAGAGAAGTATTTAGAGGAAGCGAGACCGAAACTTCGTAGACCAAAATACCGAAATGATTTTGTGTTTTTAAATCATC
ACGGTCAAGGACTCACAAGACAAGGTTTCTGGAAAATTTTAAAAGGTATTGCGAAAGAATCTGGCATTGAAAAGCCGATT
ACACCGCACACTTTGCGTCATTCATTCGCCACTCATTTACTTGAAAATGGGGCTGATTTAAGGTCGGTTCAAGAACTCCT
TGGTCACGCCGATATCTCCACTACACAAATTTATACACACGTAACAAAGCTGCGGTTGAAAGATGTCTACAAACAATTCC
ACCCGCGCGCTTAA

Protein sequence :
MNDLIEDFLHFLIVERGLSANTIKAYERDLRYFVSYMDVAKGLTDPNTLERSDIVGFMAFARQEGKSPRSVARYIASLRS
FFHYLMHDGKMSHDPMIQIETPKQAQGLPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLH
LHMGFIQTIGKGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGLTRQGFWKILKGIAKESGIEKPI
TPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYTHVTKLRLKDVYKQFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-57 43
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-57 43