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Name : polA (lmo4a_1621) Accession : YP_005926614.1 Strain : Listeria monocytogenes L99 Genome accession: NC_017529 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : - COG ID : - EC number : 2.7.7.7 Position : 1617142 - 1619799 bp Length : 2658 bp Strand : - Note : DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA sequence : GTGAATGACAATATCGAGGAGGATATCCCTGTGAATAAATTAGTATTAATTGATGGAAATAGTATTGCGAATCGCGCTTT TTATGCGTTACCGCTTTTAAATAACGATAAAGGTGTTTACACAAATGCGGTGTATGGTTTCGCAATGATGTTGATGAATG TACTCGAAAAAGAAAAACCTAGCCATGTGCTCGTTGCATTTGATGCTGGAAAAACAACTTTCAGACATACAACATTTAAA GGTTATAAAGGCGGACGTCAAAAAACTCCAAGTGAGTTATCTGAACAGTTTCCATTCATCCGAGAACTTTTAACGGCGTA TGATATCCCGCAATATGAACTTGCCAATTACGAGGCAGATGATATTATCGGAACATTGACGAAAAAAGCGGAAGCAGATG GAATGGAAGTAGCAATCATTACCGGAGACCGCGACTTAACGCAATTAGCTTCTGAAAAAACAACGGTTTATATTACTAAA AAAGGTATAGCCGATATGGAAACCAACACACCAGAAACACTAAAAGAAAAATACAATCTGACTCCTGAACAAATCATTGA TATGAAAGGTTTAATGGGCGATTCCTCCGATAATATTCCTGGTATTCCAGGCGTTGGTGAAAAAACAGCCTTAAAACTCT TACATGAATTTGGCGGAACGGTGGAAAGTGTGTTAGAGCATGCCGAGGAAATTTCCGGTAAAAAACTAAAAGAAAAAGTA CTGGAAAATAAAGAATTAGCTATTTTAAGTAAAGAACTAGCTACAATCAATGTAGATTCACCGATTGAATGCACAGTTGA AAGCACAAAATATGACGGTTATCAAACGGAAAAAGTAATTCCTTTATTAAAAGAAATGAACTTTACAACACTTTTGAAGA ATATCGAGGGAGATACACCGGAAGAAGCAAAAGAATTAAAAGAACTATCTTTTGAAATCGTAACAGAATTAAAAGAAAAA CATTTTGGTGGGAAAACTGCGCTTTATGTGGAGTTAGAAAATGATAATTATCATACATCTAATTTCATTGGATTAACAGT ACATTCTAGCCAAGGGACGTATTTCTTTACGAAGGAAACTGCTGAAAATAGTGAGGCGTTCCGTGAATGGGTAGAAAGTG AACAAACAAAAGTAGTATATGATGCGAAGAAAACAATGGTTGCAATGAATCGCATTGGTTTAGCGATTTCTGGTATTACC TTTGATATCATGTTAGCTTCTTATTTACTAAATCCATCTGACTCGATTGATGATTTTACAAGCGTTGCAGTAAGACATGA TTACACAGAAGTCGAAACGGATGAGGCAGTCTACGGAAAAGGCGCCAAACGTAGCACACCAGAAGAAAGCATTGTTGCGT CCCACTTAGCTAGAAAAGCGGTAGCCATTGCTGACTTAGAGAAAAGACTGGTTGCTGATTTAGAGGAAAATGAACAATTA GCTTTGATGGAAGATTTAGAGTTGCCACTGACTTTTGTATTAGCAGAAATGGAAATGCAAGGGGTTAGTGTAGATACAGA ACGTCTAGAGAATATGAAAGTGGAGCTAGCGGGTAGACTGAAAACATTGGAAGAGTCGATCCATTCTCTAGCCGGCGAAG CATTCAATATTAATTCACCGAAACAACTAGGTGTGATTTTATTTGAAAAGCTTGGTCTCCCAGCGGTCAAGAAAACAAAA ACAGGTTATTCAACTGCTGCCGATGTACTGGAAAGTTTATCTGGTAAACACGCGATTATTGATGAAATTTTGTTATATCG TCAACTTGGTAAAATTCAGTCCACTTATATCGAAGGACTGCTTAAAGTGACAGATAAAGAAACACATAAAGTGCACACAC GTTTCAACCAAACATTAACACAAACAGGACGCTTAAGTTCAGTTGATCCGAACTTGCAAAATATCCCTATTCGTTTAGAA GAAGGACGGAAAATAAGACAAGTTTTCGTACCGAGTAAACCAGGTTGGAAAATGTTTTCAGCCGATTATTCGCAAGTAGA GCTGAGAGTCTTAGCACATATTTCGGAAGATGAAAATTTAATTTATGCATTTAAGCACGATTATGATATTCATACGAAAA CGGCGATGGACGTGTTTCATGTTGAACAAGACGAAGTGGATTCATTAATGCGTCGTCAAGCTAAAGCGGTCAACTTTGGT ATTGTATATGGAATTAGTGATTATGGGCTTTCGCAAAACCTTGGTATTACGCGTAAAGAAGCAAAAGACTTCATTGATCG TTACTTTGTGAGTTATCCAGCCGTGAAAGAATATATGCAAGATATCGTTCGTTTTGCGAAAGAAAAAGGCTATGTAGAGA CCATTTTACATCGTCGTCGGTATATTCCAGAGATTGTCAGTCGTAATTTTAATGTTCGCGGATTTGCAGAAAGAACGGCG ATGAACACGCCTATTCAAGGTAGTGCCGCTGATATTATCAAAAAAGCGATGATTCTCATGAGCGAGCGTTTAGTATCCGA AAAATTAGAAGCCAAATTATTACTTCAAGTGCACGATGAATTGATCTTCGAAGCACCTGAAGCCGAAATAGCTAAATTAG AAGAAATTGTCCCAGATGTTATGGAAAATGCAGTAGAGCTTTCTGTACCGCTAAAAGTAGATAGCGCATTTGGTGACACT TGGTACGACGCGAAATAA Protein sequence : MNDNIEEDIPVNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFK GYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITK KGIADMETNTPETLKEKYNLTPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKV LENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEEAKELKELSFEIVTELKEK HFGGKTALYVELENDNYHTSNFIGLTVHSSQGTYFFTKETAENSEAFREWVESEQTKVVYDAKKTMVAMNRIGLAISGIT FDIMLASYLLNPSDSIDDFTSVAVRHDYTEVETDEAVYGKGAKRSTPEESIVASHLARKAVAIADLEKRLVADLEENEQL ALMEDLELPLTFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEAFNINSPKQLGVILFEKLGLPAVKKTK TGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLE EGRKIRQVFVPSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFG IVYGISDYGLSQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTA MNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDT WYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 50 |
