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Name : treC-2 (lmo4a_1310) Accession : YP_005926303.1 Strain : Listeria monocytogenes L99 Genome accession: NC_017529 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : - COG ID : - EC number : 3.2.1.93 Position : 1290381 - 1292027 bp Length : 1647 bp Strand : - Note : Glycosidases DNA sequence : ATGACAAAGTTTGCTCAAAAAACAATTTATCAAGTGTATCCGAAATCCTTTTATGATACGACTGGCGATGGTACTGGGGA TATTCCCGGTATCACCGCCAAGCTTGATTATTTACAAAAACTCGGAATTGAGATGATTTGGCTGAATCCATTTTATCCTT CTCCGCAAAATGATAACGGCTATGATATCGCTGACTATACCGCGGTTGATCCTTTATTTGGTACGATGGACGATGTGACA ACGCTTATCAAGGAAGCGAAAAAAAGAAATATTGGGATTATGATTGACTTAGTATTAAATCATACTTCAACAGAGCATCC TTGGTTTAAAAAAGCGCTTGCTGGTGATCCATTCTATCGTGATTTTTACTATTTCCGCCCAGCAAAAGCCGATGGTTCCC CTCCAACAAATTGGGTTTCCAAATTCGGCGGTAATGCTTGGGAAAAATTGCCTGACTCCTCTGAGTACTATTTGCATTTA TACGATGTTACTCAAGCTGATTTAGACTGGGCCAATCCGAATGTACGCGAGGCACTCTTTGATGTCGTGAATTTTTGGAT TGATAAAGGCGTGGAAGGTTTTCGTTTAGATGTATTAAATGTGATTGCCAAACCTAAGTTTTTAGAAGATGATTTTGAGG GTGATGGCCGTCGTTTTTATACAGATGGACCAGGAATTCATGCTTATTTAAAAGAACTACATGAACGAACTTTTGGCGAT AAACCTATTGTAACAGTTGGAGAAATGTCATCTACGGATATTGATAACTGCATTCGTTATAGTAATCCAGACGAAAAAGA ATTATCGATGGTTTTTCATTTCCATCATTTGAAAGTAGACTATCCTGATGGAGAAAAATGGCGTTTAGCGGATGTGAATT TCGAGAACTTGAAATCTATTTTCCATACGTGGCAAGTTGCGATGTCAGATGAAAATGGTTGGGATGCGCTTTTCTGGAAC AACCATGACCAACCTCGAGCCCTTGGTCGCTTTGCTTCCGACAAGCCGGAACATTATTATCATTCTGCGACCCTACTTGG CGCAACGATTCATTTTATGCGAGGTACACCGTTTGTTTATATGGGAGAAGAAATTGGTATGATGAATCCAAAATTCCCTA CCATTGATGATTATGTGGATGTGGAAACGCTCAACCATTTTGATATTTTACAAAAAAACGGACTTAGTGAACAGGAAGTA ATGGAGATTATTAAAGAACGTTCGCGCGATAACAGCCGGACTCCTATGCAATGGGACGATTCGCAAAATGCCGGTTTTAC AACTGGTACCCCTTGGCTAAAAGTGGCTGATAATGCAAAGGAAATAAATGTTCAAACTGCTTTATCTAATAAAGCGAGCA TTTTCTATTTTTACCAAAAACTAATCGCACTCCGGAAAGAGCATCCTGTCATTCAAACGGGTGATTACACACCATGTTTG ACGGAAGAAGATTCTATTATCGCCTACAAGCGTTCAAACGAAACTACTTCCCTTCTTTCCATTCATCATTTTGGTTCCGA GAAGAAAAAAATTCAACTGCCAACTGAGTTTTTAAATGCTGAAGTACTTCTTTCTAATTATGAGCGCCAGAGAATCAGTT CTGAACTGGAATTAGCGCCATATGAAACATTAACATTAATACAATAA Protein sequence : MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIEMIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVT TLIKEAKKRNIGIMIDLVLNHTSTEHPWFKKALAGDPFYRDFYYFRPAKADGSPPTNWVSKFGGNAWEKLPDSSEYYLHL YDVTQADLDWANPNVREALFDVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRRFYTDGPGIHAYLKELHERTFGD KPIVTVGEMSSTDIDNCIRYSNPDEKELSMVFHFHHLKVDYPDGEKWRLADVNFENLKSIFHTWQVAMSDENGWDALFWN NHDQPRALGRFASDKPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFDILQKNGLSEQEV MEIIKERSRDNSRTPMQWDDSQNAGFTTGTPWLKVADNAKEINVQTALSNKASIFYFYQKLIALRKEHPVIQTGDYTPCL TEEDSIIAYKRSNETTSLLSIHHFGSEKKKIQLPTEFLNAEVLLSNYERQRISSELELAPYETLTLIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-108 | 42 |
