Gene Information

Name : MRGA423_21295 (MRGA423_21295)
Accession : YP_005924495.1
Strain : Mycobacterium tuberculosis RGTB423
Genome accession: NC_017528
Putative virulence/resistance : Unknown
Product : transposase IS6110
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3789380 - 3790555 bp
Length : 1176 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
TTGCGGTGGGGTGTCGAGTCGATCTGCACACAGCTGACCGAGCTGGGTGTGCCGATCGCCCCATCGACCTACTACGACCA
CATCAACCGGGAGCCCAGCCGCCGCGAGCTGCGCGATGGCGAACTCAAGGAGCACATCAGCCGCGTCCACGCCGCCAACT
ACGGTGTTTACGGTGCCCGCAAAGTGTGGCTAACCCTGAACCGTGAGGGCATCGAGGTGGCCAGATGCACCGTCGAACGG
CTGATGACCAAACTCGGCCTGTCCGGGACCACCCGCGGCAAAGCCCGCAGGACCACGATCGCTGATCCGGCCACAGCCCG
TCCCGCCGATCTCGTCCAGCGCCGCTTCGGACCACCAGCACCTAACCGGCTGTGGGTAGCAGACCTCACCTATGTGTCGA
CCTGGGCAGGGTTCGCCTACGTGGCCTTTGTCACCGACGCCTACGCTCGCAGGATCCTGGGCTGGCGGGTCGCTTCCACG
ATGGCCACCTCCATGGTCCTCGACGCGATCGAGCAAGCCATCTGGACCCGCCAACAAGAAGGCGTACTCGACCTGAAAGA
CGTTATCCACCATACGGATAGGGGATCTCAGTACACATCGATCCGGTTCAGCGAGCGGCTCGCCGAGGCAGGCATCCAAC
CGTCGGTCGGAGCGGTCGGAAGCTCCTATGACAATGCACTAGCCGAGACGATCAACGGCCTATACAAGACCGAGCTGATC
AAACCCGGCAAGCCCTGGCGGTCCATCGAGGATGTCGAGTTGGCCACCGCGCGCTGGGTCGACTGGTTCAACCATCGCCG
CCTCTACCAGTACTGCGGCGACGTCCCGCCGGTCGAACTCGAGGCTGCCTACTACGCTCCAACGCCAGAGACCAGCCGCC
GGCTGAGGTCTCAGATCAGAGAGTCTCCGGACTCACCGGGGCGGTTTGATTACCGCGATCGGCGGACCTTGCGATGTGCA
GGCATTGCCCGAAAGCCAGCTGCCAGAGCTGGCCGTGCAGATGCGTCGGCGGCTCATAGAAACAGTGACGGCTACCGGTG
GCCATCTCGGCGCGGGACTTGGCATGGTAGAGCTGACCATCGCATTGCATCGGGTGTTCACCTCGCCACACGACATCGTG
GTGTTCGACACCGGGCACCAAACCTATCCGCACAAGCTGCTCACCGGCCGCGGTAA

Protein sequence :
MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVER
LMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVAST
MATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAPTPETSRRLRSQIRESPDSPGRFDYRDRRTLRCA
GIARKPAARAGRADASAAHRNSDGYRWPSRRGTWHGRADHRIASGVHLATRHRGVRHRAPNLSAQAAHRPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-63 52
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-64 52
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 1e-62 52
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-63 52
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-62 52
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-62 52
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-62 52
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-64 52
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-64 52
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-64 52
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-63 51
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 1e-61 51
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-63 51
Z1198 NP_286733.1 transposase Not tested TAI Protein 7e-64 51
Z1638 NP_287141.1 transposase Not tested TAI Protein 7e-64 51
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-64 51
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-60 51
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-53 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MRGA423_21295 YP_005924495.1 transposase IS6110 VFG1602 Protein 1e-60 51