Gene Information

Name : CCDC5079_2934 (CCDC5079_2934)
Accession : YP_005914357.1
Strain : Mycobacterium tuberculosis CCDC5079
Genome accession: NC_017523
Putative virulence/resistance : Unknown
Product : transposase IS6110
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3529554 - 3529958 bp
Length : 405 bp
Strand : -
Note : -

DNA sequence : 
TTGCGGTGGGGTGTCGAGTCGATCTGCACACAGCTGACCGAGTTGGGTGTGCCGATCGCCCCATCGACCTACTACGACCA
CATCAACCGGGAGCCCAGCCGCCGCGAGCTGCGCGATGGCGAACTCAAGGAGCACATCAGCCGCGTCCACGCCGCCAACT
ACGGTGTTTACGGTGCCCGCAAAGTGTGGCTAACCCTGAACCGTGAGGGCATCGAGGTGGCCAGATGCACCGTCGAACGG
CTGATGACCAAACTCGGCCTGTCCGGGACCACCCGCGGCAAAGCCCGCAGGACCACGATCGCTGATCCGGCCACAGCCCG
TCCCGCCGATCTCGTCCAGCGCCGCTTCGGACCACCAGCACCTAACCGGCTGTGGGTAGCAGACCTCACCTATGTGTCGA
CCTAG

Protein sequence : 
MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVER
LMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT48692.1 transposase R14 Not tested PAI I 4787 Protein 2e-15 50
c3595 NP_755470.1 transposase Not tested PAI I CFT073 Protein 3e-15 50
r14 AAC61721.1 transposase R14 Not tested PAI I CFT073 Protein 5e-15 49
CDHC03_0163 YP_005137212.1 transposase-like protein Not tested Not named Protein 9e-23 49
CDCE8392_1985 YP_005134516.1 transposase-like protein Not tested Not named Protein 9e-23 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CCDC5079_2934 YP_005914357.1 transposase IS6110 VFG1716 Protein 7e-16 50