Gene Information

Name : CCDC5079_2404 (CCDC5079_2404)
Accession : YP_005913827.1
Strain : Mycobacterium tuberculosis CCDC5079
Genome accession: NC_017523
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2914965 - 2915864 bp
Length : 900 bp
Strand : -
Note : -

DNA sequence :
ATGGATCCTGCAGGTAACCCAGCGACCGGTACGGCGCGGGTCAAGCGCGGCATGGCCGAGATGCTCAAGGGCGGCGTCAT
CATGGACGTTGTCACCCCGGAGCAGGCCCGCATCGCCGAGGGCGCCGGTGCGGTTGCGGTAATGGCGTTGGAAAGGGTGC
CCGCCGATATCCGCGCCCAGGGCGGGGTGTCGCGGATGAGTGACCCCGACATGATCGAGGGCATCATCGCCGCGGTCACC
ATCCCGGTGATGGCTAAAGTGCGCATCGGCCACTTTGTCGAGGCGCAGATCCTGCAGACGTTGGGCGTCGACTACATCGA
CGAGTCCGAGGTGCTGACGCCCGCTGACTACGCCCACCATATCGACAAGTGGAACTTCACGGTGCCTTTCGTGTGTGGGG
CGACCAATCTCGGTGAGGCGTTGAGGCGCATCAGCGAGGGAGCGGCCATGATCCGGTCCAAGGGCGAGGCCGGGACCGGA
GACGTCTCCAACGCGACCACACACATGCGGGCCATCGGTGGTGAGATCCGCCGGTTGACGTCGATGTCGGAGGACGAATT
GTTTGTCGCGGCAAAAGAATTGCAAGCGCCCTATGAACTCGTTGCCGAGGTAGCTCGGGCGGGCAAGTTGCCGGTCACAC
TGTTCACCGCCGGGGGTATCGCCACGCCCGCCGACGCGGCGATGATGATGCAGCTTGGCGCCGAGGGCGTCTTCGTGGGT
TCCGGTATTTTCAAGTCCGGCGCCCCTGAGCACCGCGCCGCCGCGATCGTCAAGGCCACCACGTTCTTCGACGATCCCGA
TGTGCTGGCCAAGGTGTCGCGCGGGCTGGGCGAGGCGATGGTGGGCATCAACGTGGACGAGATCGCTGTCGGTCATCGGC
TCGCCCAGCGCGGCTGGTGA

Protein sequence :
MDPAGNPATGTARVKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVT
IPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTG
DVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVG
SGIFKSGAPEHRAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDEIAVGHRLAQRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-113 81
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-113 81
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-113 81