Gene Information

Name : SRH_00535 (SRH_00535)
Accession : YP_005904728.1
Strain : Mycoplasma hyorhinis MCLD
Genome accession: NC_017519
Putative virulence/resistance : Unknown
Product : transposase, IS861
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 123552 - 124646 bp
Length : 1095 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGAAATTTAAGATTCGTAATAATAAACCTAAAAAGGTATCAAAAAATTTTGACAGCAAAGATGAATCAAATTCTTTAAC
ATCTGTATATGAAGAACTCAAACACTTTAAAAAAAGAGAAAAAAACTTTGAAAAAGAAATTAAACTTTTAAAAAAGGAAA
ATGAAGTACTAAAAAAGTGAAAAACCTTGGTAAAGATCTTTGACTCAAATCAACCAAGGCAAGAAAAAATAAAAAAAATT
TATAATAGAGTAAAAGCTGATAAAAACCTTCGCTTAACTCAAGTATTAAAAGAGTTTTCTATTCCTATATCTACTTTTTA
TTATGAACTCAAAAAAGAAGATTTTGACAAGAAAAATGAAGAAATTATAAGCCAAGTAAAGCTTATTTTTGAAGAAAATA
AAGCAAGATATGGAAAAAGAAGAATAAAGGCTGAACTTAATAATAGAGAATATAAAATTGGATTTAAAAAAGTTCGCAGA
TTAATGGAAAAATTCAATCTCAAAGCAATTTGTCCAAGAAGAAAATACAAATCTTACAAAGGAACTGTTGGTAAAATCGC
AGACAATATTTTAAATAGAAATTTTGTTGCTACTCAACCAAATCAAAAATGAACTACAGATGTAACTGAATTTAGTGGTC
CATTTGGAAGAGCATATTTATCACCCATTTTAGATATGTTTAATGGCGAAGTTATTGCTTGAGAGTTGTCTACAAGCGCT
AATAACCAGCAAATTAGAAAAATGCTTCAAAAAGCATTTTCAAAGCACAAAAATCTTGAGGGTTTAATTTTTCACAGTGA
TCAAGGTTGACAACATCAACATAGACAATTTTCAGAAAAATTAAAACAAAAAGGAATAATTCAGTCCATGTCTCCAAAAG
GAAATTGTTTAGATAATAGCGTTATTGAATCGTTTTTTGGGACATTAAAAAGAGAATGTTTTTATGGTCGTGAAAAAGAA
TTTTTAACTTTTAAACAACTTCACAAAGCAATTACAAATTATATTTATTATTACAATCACAAACGAATTAAAGACAAAAT
AAAATGAATGTTTCCCATTAAATTTAGGGAAACATTCATTTCAAATTATAATTAA

Protein sequence :
MKFKIRNNKPKKVSKNFDSKDESNSLTSVYEELKHFKKREKNFEKEIKLLKKENEVLKKWKTLVKIFDSNQPRQEKIKKI
YNRVKADKNLRLTQVLKEFSIPISTFYYELKKEDFDKKNEEIISQVKLIFEENKARYGKRRIKAELNNREYKIGFKKVRR
LMEKFNLKAICPRRKYKSYKGTVGKIADNILNRNFVATQPNQKWTTDVTEFSGPFGRAYLSPILDMFNGEVIAWELSTSA
NNQQIRKMLQKAFSKHKNLEGLIFHSDQGWQHQHRQFSEKLKQKGIIQSMSPKGNCLDNSVIESFFGTLKRECFYGREKE
FLTFKQLHKAITNYIYYYNHKRIKDKIKWMFPIKFRETFISNYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 1e-49 48
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 2e-53 47
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 2e-53 47
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 7e-56 46