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Name : hsdM (NMBNZ0533_0876) Accession : YP_005903493.1 Strain : Neisseria meningitidis NZ-05/33 Genome accession: NC_017518 Putative virulence/resistance : Unknown Product : type I restriction-modification system, M subunit Function : - COG functional category : - COG ID : - EC number : 2.1.1.72 Position : 928952 - 930496 bp Length : 1545 bp Strand : + Note : - DNA sequence : ATGATGACCGAAATGCAACAACGCGCCCAACTGCACCGCCAAATTTGGAAAATTGCCGACGAAGTACGCGGCGCGGTGGA TGGCTGGGACTTTAAACAATACGTTCTCGGCACACTTTTCTACCGCTTTATCAGCGAAAACTTCACCGACTATATGCAGG CAGGCGACAGCAGTATTGATTACGCCGCTATGCCGGACAGCATCATCACGCCCGAAATCAAAGACGATGCCGTCAAAGTT AAAGGCTATTTCATCTACCCCAGCCAGCTTTTTTGCAATATTGCCGCCGAAGCCCATCAAAACGAAGAGCTCAACACCAA GCTGAAAGAAATCTTTACCGCGATTGAAAGCTCCGCCTCCGGCTATCCGTCCGAACAAGACATTAAAGGCCTGTTTGACG ACTTCGATACCACCAGCAGCCGGCTCGGCAGCACAGTTGCCGACAAGAACAAACGCCTTGCCGCCGTCCTCAAAGGCGTG GCGGAACTTGATTTCGGCAGTTTTGAAGACCACCACATCGACCTTTTCGGCGATGCCTACGAATACCTGATTTCCAACTA CGCCGCCAACGCAGGCAAATCCGGCGGCGAATTTTTCACCCCGCAAAGCGTATCCAAGCTGATTGCGCGGCTGGCGGTGC ACGGGCAGGAGAAAGTAAACAAAATCTACGACCCAGCTTGCGGCTCGGGCAGCCTGCTCTTGCAGGCGAAAAAACAGTTT GACGAGCACATCATCGAAGAAGGCTTCTTCGGGCAGGAAATCAACCACACCACCTACAACCTCGCCCGCATGAATATGTT TCTGCACAACGTCAATTACAACAAATTCCACATCGAATTGGGCGACACACTGACTAATCCCAAGCTCAAAGACAGCAAAC CCTTTGATGCCATCGTTTCCAATCCGCCTTATTCCATCAACTGGATAGGCAGCGACGACCCCACCTTAATCAACGACGAC CGCTTTGCCCCCGCAGGCGTACTCGCACCGAAATCCAAAGCCGATTTTGCCTTCATCCTGCACGCACTGAACTACCTTTC CGGCAGAGGCCGCGCCGCCATCGTCTCTTTCCCCGGTATTTTCTATCGCGGCGGCGCAGAGCAGAAAATCCGCCAATATC TGGTGGAGGGCAACTACGTGGAAACCGTGATTGCCCTTGCGCCCAATCTCTTTTACGGCACCGGCATCGCCGTCAATATC CTGGTTTTGTCCAAACACAAAGACAATACCGACATCCAATTTATCGACGCAGGCAGCTTCTTTAAAAAAGAAACCAACAA CAACGTCTTAACCGAAGAACACATTGCCGACATCGTCAAACTCTTCGCCGACAAAGCCGATGTGCCGCATATCGCCCAAA ACGCTGCCCAGCAAACCGTCAAAGACAACGGCTACAACCTCGCCGTCAGCAGCTATGTTGAACCCGAAGACACACGCGAA ATTATCGACATCAAACAGCTTAACGCCGAAATCGGCGAAACCGTCGCCAAAATCGAACGGCTGCGGCGCGAAATTGACGA AGTGATTGCAGAGATTGAGGCCTAG Protein sequence : MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFISENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKV KGYFIYPSQLFCNIAAEAHQNEELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV AELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEKVNKIYDPACGSGSLLLQAKKQF DEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKFHIELGDTLTNPKLKDSKPFDAIVSNPPYSINWIGSDDPTLINDD RFAPAGVLAPKSKADFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFYGTGIAVNI LVLSKHKDNTDIQFIDAGSFFKKETNNNVLTEEHIADIVKLFADKADVPHIAQNAAQQTVKDNGYNLAVSSYVEPEDTRE IIDIKQLNAEIGETVAKIERLRREIDEVIAEIEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | NP_645209.1 | type I site-specific deoxyribonuclease LldI chain hsdM | Not tested | vSa¥á | Protein | 4e-93 | 41 |
| SAS0394 | YP_042520.1 | restriction enzyme modification protein | Not tested | vSa¥á | Protein | 4e-93 | 41 |
| SAS1732 | YP_043848.1 | type I restriction enzyme modification protein | Not tested | vSa¥â | Protein | 2e-93 | 41 |
| hsdM | NP_646568.1 | hypothetical protein | Not tested | vSa¥â | Protein | 2e-93 | 41 |
| SAV1808 | NP_372332.1 | type I restriction enzyme EcoR124II M protein | Not tested | vSa¥â | Protein | 2e-93 | 41 |
| SA1626 | NP_374915.1 | hypothetical protein | Not tested | vSa¥â | Protein | 2e-93 | 41 |
| SAMSHR1132_03780 | YP_005324900.1 | putative type I restriction enzyme modification protein | Not tested | vSa¥á | Protein | 9e-93 | 41 |
| SAMSHR1132_16570 | YP_005326167.1 | restriction-modification system, M subunit | Not tested | vSa¥â | Protein | 2e-92 | 41 |
